Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3483 |
Symbol | |
ID | 5192373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3890998 |
End bp | 3892308 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640587935 |
Product | C4-dicarboxylate transporter DctA |
Protein accession | YP_001268793 |
Protein GI | 148548691 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.225944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.530275 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAAAT GGTGCTCGCG TTCGATTTTC CTGCAAGTCG TACTCGGCCT TGCCCTCGGC ATCGCCTGCG GTCTGAGCTT CCCCGACCTC TCCCTGCAAC TCAAACCCCT CGGCGACGGC TTCATCAAGC TGATCAAGAT GCTCATCGGC CTGATCGTGT TCTGCGTGGT GGTCAGCGGC ATTTCGGGTG CGGGCGACCT GAAAAAGGTC GGCCGCATCG GCCTGAAGTC GGTGATCTAC TTCGAAGTGC TGACGACCCT GGCGCTGGTG ATCGGCCTGG TGTTCGCCTT CACCAGTGGC ATTGGCAGCG GTGCCAACAT TCACCTGGAT CAACTGTCCG CCGCCGATGC CAACGGCTTG GCCGAGCGCG GCCAGCACAT CCATGGCGCC ACGGCGTTCT TCATGGACCT GATCCCCACC TCGGTGATCG GTGCCTTCGC CGACAACAAC ATTCTTCAGG TGCTGCTGTT CTCGGTGCTG TTCGGCAGCG CGCTGAACCT GGTGGGTGAC TCGGCCGCCG GCATTTCGCG ACTGATCAAC GAACTGAGCC ATGTGATCTT CCGCATCATG GGCATGATCG TGCGCCTGGC GCCGATCGGC GTGTTCGGCG CCATTGCCTT CACCACCAGC AAGTACGGCC TGGCGTCGCT GCAGCACCTG GGCGGGCTGG TGGCGCTGTT CTACCTGACC TGTGCTGGCT TCGTGCTGAT CGTGCTGGGC ACCGTCATGC GCCTGTCGGG CCTGAAACTG CTGCCGTTGA TCAAGTACCT GCGTGAAGAG CTGACCATCG TCCTGGGCAC CGCCTCTTCC GACGCTGTGC TGCCACAGAT CATGCGCAAG CTTGAGCACC TGGGCATCGG CAGTTCCACG GTCGGCCTGG TGATCCCTAC CGGCTACTCG TTCAACCTCG ATGGTTTTTC CATCTACCTC ACCCTGGCGA TCGTGTTCAT CGCCAACGCC ACCGGCACGC CACTGGAAAT GACCGACCTG CTGACCATCC TGCTGGTGTC GTTGGTGACT TCCAAGGGGG CTCACGGCAT CCCAGGCTCG GCACTGGTGA TTCTTGCCGC CACCCTGACT GCGGTACCGG CGATCCCTGT GGTAGGCCTG GTACTGGTAC TGGCGGTGGA CTGGTTCATG GGTATCGGCC GGGCGTTGAC CAACCTGATC GGCAACTGCG TGGCCACCGT GGCCATTGCC CGTTGGGAGA AGGACATTGA CCTGGAGCGT GCGCAGAACG TACTCGACGG CAAGCCTGGC TTTGCCCCCA CGCCCCGCAA GCAACCCAAT GCCCATCAAC AGGAATTCTG A
|
Protein sequence | MLKWCSRSIF LQVVLGLALG IACGLSFPDL SLQLKPLGDG FIKLIKMLIG LIVFCVVVSG ISGAGDLKKV GRIGLKSVIY FEVLTTLALV IGLVFAFTSG IGSGANIHLD QLSAADANGL AERGQHIHGA TAFFMDLIPT SVIGAFADNN ILQVLLFSVL FGSALNLVGD SAAGISRLIN ELSHVIFRIM GMIVRLAPIG VFGAIAFTTS KYGLASLQHL GGLVALFYLT CAGFVLIVLG TVMRLSGLKL LPLIKYLREE LTIVLGTASS DAVLPQIMRK LEHLGIGSST VGLVIPTGYS FNLDGFSIYL TLAIVFIANA TGTPLEMTDL LTILLVSLVT SKGAHGIPGS ALVILAATLT AVPAIPVVGL VLVLAVDWFM GIGRALTNLI GNCVATVAIA RWEKDIDLER AQNVLDGKPG FAPTPRKQPN AHQQEF
|
| |