| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3475 |
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| Symbol | |
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| ID | 5192426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3880986 |
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| End bp | 3881786 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640587927 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001268785 |
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| Protein GI | 148548683 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.926994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00696056 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACAC GCAAATCAAT GGCCCTGCTG CTGTACTTCT TCTTCCTGCT GGTGCCGATC
TACTGGTTGC TGAACATGTC GTTCAAGAGC AACGCCGAGA TCCTTGGCGG CCTGACCCTG
TGGCCGCAGG CGTTCACGCT CGACAACTAC CGAGTGATCT TCACCGACGC CAGCTGGTAC
AGCGGCTACA TCAACTCGCT GTACTACGTG TGCCTGAACA CGCTGATTTC ACTGCTCGTG
GCGTTGCCCG CGGCCTATGC GTTCTCGCGC TACCGCTTTC TCGGCGACCG CCACCTGTTC
TTCTGGCTGC TGACCAACCG CATGGCGCCA CCGGCGGTGT TCCTGCTGCC GTTTTTCCAG
TTGTACTCGT CGATCGGGCT GTTCGATACC CACATTGCCG TGGCGCTGGC CCATTGTCTG
TTCAACGTAC CGCTGGCGGT GTGGATCCTG GAGGGTTTCA TGTCGGGCGT GCCAAGGGAA
ATCGACGAAA CCGCCTACAT CGACGGCTAC AGTTTTCCAC GCTTCTTCGT GAAGATCTTC
ATACCGCTGA TTGGCTCCGG CATCGGCGTC ACGGCGTTTT TCTGTTTCAT GTTCTCCTGG
GTCGAACTGC TGCTGGCGCG CACCCTGACC TCGGTGAATG CCAAGCCGAT TGCCGCGGTG
ATGACCCGCA CGGTGTCGGC ATCGGGCATC GACTGGGGTG TGCTGGCGGC GGCGGGGGTG
CTGACCATCT TGCCGGGCAT GCTGGTGATC TGGTTCGTGC GCAATCATGT GGCCAAGGGC
TTCGCCCTGG GCCGGGTGTG A
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| Protein sequence | MSTRKSMALL LYFFFLLVPI YWLLNMSFKS NAEILGGLTL WPQAFTLDNY RVIFTDASWY
SGYINSLYYV CLNTLISLLV ALPAAYAFSR YRFLGDRHLF FWLLTNRMAP PAVFLLPFFQ
LYSSIGLFDT HIAVALAHCL FNVPLAVWIL EGFMSGVPRE IDETAYIDGY SFPRFFVKIF
IPLIGSGIGV TAFFCFMFSW VELLLARTLT SVNAKPIAAV MTRTVSASGI DWGVLAAAGV
LTILPGMLVI WFVRNHVAKG FALGRV
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