| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3468 |
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| Symbol | clpX |
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| ID | 5190237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3873037 |
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| End bp | 3874320 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640587916 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001268778 |
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| Protein GI | 148548676 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.813108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000653711 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGACA CCCGTAACGG CGAGGACAGC GGCAAATTGC TTTATTGCTC CTTCTGCGGC
AAAAGCCAGC ACGAAGTGCG CAAACTGATT GCCGGGCCCT CGGTATTTAT CTGCGACGAG
TGCGTCGACC TGTGCAACGA CATCATCCGT GAGGAGGTGC AGGAAGCCCA GGCCGAGAGC
AGCGCGCACA AATTGCCTTC GCCGAAAGAA ATCAGCGGCA TCCTGGACCA GTACGTGATT
GGTCAGGAGC GCGCGAAGAA GGTGCTGGCC GTAGCGGTGT ACAACCACTA CAAGCGCCTG
AACCAGCGTG ACAAGAAGGG TGACGAAGTC GAACTGGGCA AGAGCAACAT CCTGCTCATC
GGGCCGACCG GCTCGGGTAA GACCCTGCTC GCCGAAACCC TGGCACGCCT GTTGAACGTA
CCGTTCACCA TTGCTGACGC CACCACCCTG ACCGAAGCCG GTTATGTGGG TGAGGACGTC
GAAAACATCA TCCAGAAGCT GTTGCAGAAG TGCGACTACG ACGTGGAAAA GGCCCAGATG
GGCATTGTCT ACATCGACGA AATCGACAAG ATCTCGCGCA AGTCGGACAA CCCGTCCATT
ACCCGTGATG TCTCGGGCGA GGGCGTGCAG CAGGCACTGC TGAAGCTGAT CGAAGGCACC
GTGGCCTCGG TCCCGCCGCA AGGCGGCCGC AAGCACCCGC AACAGGAATT CCTGCAGGTT
GATACCCGCA ACATCCTGTT CATCTGCGGT GGTGCGTTCT CGGGCCTGGA AAAGGTCATC
CAGAACCGCT CCACCAAAGG CGGCATCGGT TTTGGTGCCG AAGTGCGCAG CAAGGAAGAG
GGCAAGAAGG TTGGTGAGTC CCTGCGTGAG GTCGAGCCGG ACGATCTGGT CAAGTTTGGC
CTGATTCCGG AATTCGTCGG CCGCCTGCCG GTACTGGCTA CCCTCGACGA GCTGGATGAG
GCTGCGTTGA TGCAGATCCT CACCGAGCCG AAGAATGCCC TGACCAAGCA GTATGCCAAG
CTGTTCGAGA TGGAAAGCGT CGACCTCGAG TTCCGCAGCG ATGCGCTCAA GGCCGTTGCA
CGCAAGGCCC TGGAGCGCAA GACTGGCGCT CGTGGCCTGC GTTCGATCCT CGAAGGCGTG
CTGCTCGATA CCATGTATGA GATTCCTTCG AAAAAGGATG TCAGCAAGGT GGTTATCGAC
GAGAGCGTCA TTGAAGGTAC CTCGCAGCCG CTGATGATTT ACGAAAACAG CGAACCGCAA
GCCAAAGCCG CACCAGACGC CTGA
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| Protein sequence | MTDTRNGEDS GKLLYCSFCG KSQHEVRKLI AGPSVFICDE CVDLCNDIIR EEVQEAQAES
SAHKLPSPKE ISGILDQYVI GQERAKKVLA VAVYNHYKRL NQRDKKGDEV ELGKSNILLI
GPTGSGKTLL AETLARLLNV PFTIADATTL TEAGYVGEDV ENIIQKLLQK CDYDVEKAQM
GIVYIDEIDK ISRKSDNPSI TRDVSGEGVQ QALLKLIEGT VASVPPQGGR KHPQQEFLQV
DTRNILFICG GAFSGLEKVI QNRSTKGGIG FGAEVRSKEE GKKVGESLRE VEPDDLVKFG
LIPEFVGRLP VLATLDELDE AALMQILTEP KNALTKQYAK LFEMESVDLE FRSDALKAVA
RKALERKTGA RGLRSILEGV LLDTMYEIPS KKDVSKVVID ESVIEGTSQP LMIYENSEPQ
AKAAPDA
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