Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3467 |
Symbol | |
ID | 5190236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3870476 |
End bp | 3872872 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640587915 |
Product | ATP-dependent protease La |
Protein accession | YP_001268777 |
Protein GI | 148548675 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.895403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000510926 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGACCA CCCTCGACTT GCCTCTTTTG CCATTGCGCG ATGTCGTTGT TTACCCGCAC ATGGTTATCC CGCTGTTCGT GGGGCGCGAA AAGTCCATCG AAGCCCTCGA GGCGGCGATG ACGGGCGAAA AGCAGATCCT TCTGCTGGCC CAGAAGAACC CAGCCGACGA CGATCCGGGT GAGGACGCCC TGTACCGCGT CGGTACCGTT GCCACCGTGC TGCAACTGCT GAAGCTGCCT GATGGCACCG TCAAGGTGCT GGTCGAAGGC GAACAGCGGG GTGCGGTCGA GCGCTTCTCC GAAGTTGAAG GGCACATCCG TGCCGAAGTC TCCCTGATCG ACGAAACCGA CACTGCCGAG CGCGAGTCGG AAGTGTTCGT GCGCACGCTG CTGTCGCAGT TCGAACAATA CGTTCAGCTG GGCAAGAAGG TGCCTGCCGA AGTGCTGTCT TCGCTGAACA GCATCGACGA GCCAGGGCGC CTGGTCGACA CCATGGCCGC GCACATGGCC CTGAAGATCG AGCAGAAGCA GGAAATTCTT GAAATCGTCG ACTTGACGAC CCGTGTCGAG CACGTGCTGG CACTGCTGGA TGCCGAAATC GACCTCCTGC AGGTCGAAAA GCGCATTCGC GGCCGGGTCA AGAAGCAGAT GGAGCGCAGC CAGCGCGAGT ACTACCTGAA TGAGCAGATG AAGGCCATTC AGAAAGAACT TGGCGATGGT GATGAAGGCC ACAATGAAGT CGAAGAGCTG AAAAAGCGCA TCGAAGCCGC AGGTCTGCCT AAAGATGCCT TGACCAAGGC TCAGGCGGAG CTGAACAAGC TCAAGCAAAT GTCTCCGATG TCGGCCGAAG CTACCGTGGT GCGCTCGTAC CTCGACTGGT TGGTGCAGGT GCCGTGGAAG GCTCAGAGCA AGGTGCGTCT GGACCTGACC AAGGCCGAGG AAATCCTCGA TGCCGACCAC TATGGCCTGG AAGAGGTCAA GGAACGCATC CTCGAATACC TTGCCGTGCA GAAGCGCGTC AAGAAGATCC GCGGTCCGGT GCTGTGCCTG GTCGGGCCAC CCGGTGTCGG CAAGACCTCG CTGGCCGAGT CGATCGCTGC CGCCACCAAC CGCAAGTTCG TGCGCATGGC CCTGGGTGGC GTGCGTGACG AGGCCGAGAT CCGTGGCCAC CGCCGTACCT ACATCGGCTC CATGCCGGGT CGCCTGATCC AGAAGATGAC CAAGGTGGGC GTGCGCAACC CGTTGTTCCT GCTCGACGAG ATCGACAAGA TGGGCAGCGA CATGCGCGGT GACCCCGCTT CGGCACTGCT GGAAGTGCTC GACCCTGAAC AGAACCACAA CTTCAACGAC CACTACCTGG AGGTCGACTA TGACCTCTCG GACGTGATGT TCCTGTGCAC CTCGAACTCG ATGAACATCC CGCCGGCGCT GCTGGACCGG ATGGAAGTCA TCCGTCTGCC TGGCTACACC GAGGACGAAA AGATCAACAT CGCGGTCAAG TACCTGGTGC CCAAGCAGGT CAAGGCCAAC GGCTTGAAGA AGGAAGAGCT GGACGTCGAC ATCTCGGCGA TTCGCGACAT CATCCGCTAC TACACCCGTG AAGCCGGTGT GCGGGGCCTG GAGCGGCAAA TTGCCAAGGT CTGCCGCAAG GTGGTCAAGG AACATACCGG GCAGAAGCAG GTCAAGGTCA AGGTGGCCAG CGAGCAGCTG GAGCACCTGC TGGGCGTGCG CAAGTTCCGC TATGGCCTGG CCGAGCAGCA GGATCAGATC GGCCAGGTAA CCGGCCTGGC GTGGACCCAG GTGGGTGGCG AGTTGCTCAC CATCGAGGCC GTGGTCATCC CCGGCAAGGG CCAGTTGATC AAGACCGGCT CGCTGGGCGA TGTCATGGTC GAGTCGATTA CCGCCGCGCA GACCGTGGTG CGCAGCCGCG CCCGCAGCCT GGGGATTGCT GCCGACTTCC ACGAGAAGCA TGACGTGCAC ATTCACATGC CTGAGGGCGC CACGCCGAAG GACGGCCCAA GTGCCGGTAT CGGAATGTGC ACCGCACTGG TGTCGGCGCT GACGCAGATT CCGGTACGTG CCGACGTGGC CATGACCGGC GAAATCACCT TGCGTGGCCA GGTATTGGCC ATTGGCGGGC TGAAGGAAAA ACTGCTGGCG GCACACCGTG GCGGGATCAA GACGGTGATC ATTCCCGAGG AGAATGTTCG CGATCTCAAG GAGATTCCTG AAAATATCAA ACAGGATCTT CAGATCAAAC CGGTCAAATG GATTGACGAA GTCCTGCAAA TTGCGCTGCA ATACGCCCCG GAGCCCTTGC CAGATGTGGC TCCGGAGATT GTCGCGAAAG ACGAGAAGCG CGACGGCGAT GCTAAGGAAA GAATCAGCAC GCATTAG
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Protein sequence | MKTTLDLPLL PLRDVVVYPH MVIPLFVGRE KSIEALEAAM TGEKQILLLA QKNPADDDPG EDALYRVGTV ATVLQLLKLP DGTVKVLVEG EQRGAVERFS EVEGHIRAEV SLIDETDTAE RESEVFVRTL LSQFEQYVQL GKKVPAEVLS SLNSIDEPGR LVDTMAAHMA LKIEQKQEIL EIVDLTTRVE HVLALLDAEI DLLQVEKRIR GRVKKQMERS QREYYLNEQM KAIQKELGDG DEGHNEVEEL KKRIEAAGLP KDALTKAQAE LNKLKQMSPM SAEATVVRSY LDWLVQVPWK AQSKVRLDLT KAEEILDADH YGLEEVKERI LEYLAVQKRV KKIRGPVLCL VGPPGVGKTS LAESIAAATN RKFVRMALGG VRDEAEIRGH RRTYIGSMPG RLIQKMTKVG VRNPLFLLDE IDKMGSDMRG DPASALLEVL DPEQNHNFND HYLEVDYDLS DVMFLCTSNS MNIPPALLDR MEVIRLPGYT EDEKINIAVK YLVPKQVKAN GLKKEELDVD ISAIRDIIRY YTREAGVRGL ERQIAKVCRK VVKEHTGQKQ VKVKVASEQL EHLLGVRKFR YGLAEQQDQI GQVTGLAWTQ VGGELLTIEA VVIPGKGQLI KTGSLGDVMV ESITAAQTVV RSRARSLGIA ADFHEKHDVH IHMPEGATPK DGPSAGIGMC TALVSALTQI PVRADVAMTG EITLRGQVLA IGGLKEKLLA AHRGGIKTVI IPEENVRDLK EIPENIKQDL QIKPVKWIDE VLQIALQYAP EPLPDVAPEI VAKDEKRDGD AKERISTH
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