Gene Pput_3467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3467 
Symbol 
ID5190236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3870476 
End bp3872872 
Gene Length2397 bp 
Protein Length798 aa 
Translation table11 
GC content60% 
IMG OID640587915 
ProductATP-dependent protease La 
Protein accessionYP_001268777 
Protein GI148548675 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.895403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000510926 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGACCA CCCTCGACTT GCCTCTTTTG CCATTGCGCG ATGTCGTTGT TTACCCGCAC 
ATGGTTATCC CGCTGTTCGT GGGGCGCGAA AAGTCCATCG AAGCCCTCGA GGCGGCGATG
ACGGGCGAAA AGCAGATCCT TCTGCTGGCC CAGAAGAACC CAGCCGACGA CGATCCGGGT
GAGGACGCCC TGTACCGCGT CGGTACCGTT GCCACCGTGC TGCAACTGCT GAAGCTGCCT
GATGGCACCG TCAAGGTGCT GGTCGAAGGC GAACAGCGGG GTGCGGTCGA GCGCTTCTCC
GAAGTTGAAG GGCACATCCG TGCCGAAGTC TCCCTGATCG ACGAAACCGA CACTGCCGAG
CGCGAGTCGG AAGTGTTCGT GCGCACGCTG CTGTCGCAGT TCGAACAATA CGTTCAGCTG
GGCAAGAAGG TGCCTGCCGA AGTGCTGTCT TCGCTGAACA GCATCGACGA GCCAGGGCGC
CTGGTCGACA CCATGGCCGC GCACATGGCC CTGAAGATCG AGCAGAAGCA GGAAATTCTT
GAAATCGTCG ACTTGACGAC CCGTGTCGAG CACGTGCTGG CACTGCTGGA TGCCGAAATC
GACCTCCTGC AGGTCGAAAA GCGCATTCGC GGCCGGGTCA AGAAGCAGAT GGAGCGCAGC
CAGCGCGAGT ACTACCTGAA TGAGCAGATG AAGGCCATTC AGAAAGAACT TGGCGATGGT
GATGAAGGCC ACAATGAAGT CGAAGAGCTG AAAAAGCGCA TCGAAGCCGC AGGTCTGCCT
AAAGATGCCT TGACCAAGGC TCAGGCGGAG CTGAACAAGC TCAAGCAAAT GTCTCCGATG
TCGGCCGAAG CTACCGTGGT GCGCTCGTAC CTCGACTGGT TGGTGCAGGT GCCGTGGAAG
GCTCAGAGCA AGGTGCGTCT GGACCTGACC AAGGCCGAGG AAATCCTCGA TGCCGACCAC
TATGGCCTGG AAGAGGTCAA GGAACGCATC CTCGAATACC TTGCCGTGCA GAAGCGCGTC
AAGAAGATCC GCGGTCCGGT GCTGTGCCTG GTCGGGCCAC CCGGTGTCGG CAAGACCTCG
CTGGCCGAGT CGATCGCTGC CGCCACCAAC CGCAAGTTCG TGCGCATGGC CCTGGGTGGC
GTGCGTGACG AGGCCGAGAT CCGTGGCCAC CGCCGTACCT ACATCGGCTC CATGCCGGGT
CGCCTGATCC AGAAGATGAC CAAGGTGGGC GTGCGCAACC CGTTGTTCCT GCTCGACGAG
ATCGACAAGA TGGGCAGCGA CATGCGCGGT GACCCCGCTT CGGCACTGCT GGAAGTGCTC
GACCCTGAAC AGAACCACAA CTTCAACGAC CACTACCTGG AGGTCGACTA TGACCTCTCG
GACGTGATGT TCCTGTGCAC CTCGAACTCG ATGAACATCC CGCCGGCGCT GCTGGACCGG
ATGGAAGTCA TCCGTCTGCC TGGCTACACC GAGGACGAAA AGATCAACAT CGCGGTCAAG
TACCTGGTGC CCAAGCAGGT CAAGGCCAAC GGCTTGAAGA AGGAAGAGCT GGACGTCGAC
ATCTCGGCGA TTCGCGACAT CATCCGCTAC TACACCCGTG AAGCCGGTGT GCGGGGCCTG
GAGCGGCAAA TTGCCAAGGT CTGCCGCAAG GTGGTCAAGG AACATACCGG GCAGAAGCAG
GTCAAGGTCA AGGTGGCCAG CGAGCAGCTG GAGCACCTGC TGGGCGTGCG CAAGTTCCGC
TATGGCCTGG CCGAGCAGCA GGATCAGATC GGCCAGGTAA CCGGCCTGGC GTGGACCCAG
GTGGGTGGCG AGTTGCTCAC CATCGAGGCC GTGGTCATCC CCGGCAAGGG CCAGTTGATC
AAGACCGGCT CGCTGGGCGA TGTCATGGTC GAGTCGATTA CCGCCGCGCA GACCGTGGTG
CGCAGCCGCG CCCGCAGCCT GGGGATTGCT GCCGACTTCC ACGAGAAGCA TGACGTGCAC
ATTCACATGC CTGAGGGCGC CACGCCGAAG GACGGCCCAA GTGCCGGTAT CGGAATGTGC
ACCGCACTGG TGTCGGCGCT GACGCAGATT CCGGTACGTG CCGACGTGGC CATGACCGGC
GAAATCACCT TGCGTGGCCA GGTATTGGCC ATTGGCGGGC TGAAGGAAAA ACTGCTGGCG
GCACACCGTG GCGGGATCAA GACGGTGATC ATTCCCGAGG AGAATGTTCG CGATCTCAAG
GAGATTCCTG AAAATATCAA ACAGGATCTT CAGATCAAAC CGGTCAAATG GATTGACGAA
GTCCTGCAAA TTGCGCTGCA ATACGCCCCG GAGCCCTTGC CAGATGTGGC TCCGGAGATT
GTCGCGAAAG ACGAGAAGCG CGACGGCGAT GCTAAGGAAA GAATCAGCAC GCATTAG
 
Protein sequence
MKTTLDLPLL PLRDVVVYPH MVIPLFVGRE KSIEALEAAM TGEKQILLLA QKNPADDDPG 
EDALYRVGTV ATVLQLLKLP DGTVKVLVEG EQRGAVERFS EVEGHIRAEV SLIDETDTAE
RESEVFVRTL LSQFEQYVQL GKKVPAEVLS SLNSIDEPGR LVDTMAAHMA LKIEQKQEIL
EIVDLTTRVE HVLALLDAEI DLLQVEKRIR GRVKKQMERS QREYYLNEQM KAIQKELGDG
DEGHNEVEEL KKRIEAAGLP KDALTKAQAE LNKLKQMSPM SAEATVVRSY LDWLVQVPWK
AQSKVRLDLT KAEEILDADH YGLEEVKERI LEYLAVQKRV KKIRGPVLCL VGPPGVGKTS
LAESIAAATN RKFVRMALGG VRDEAEIRGH RRTYIGSMPG RLIQKMTKVG VRNPLFLLDE
IDKMGSDMRG DPASALLEVL DPEQNHNFND HYLEVDYDLS DVMFLCTSNS MNIPPALLDR
MEVIRLPGYT EDEKINIAVK YLVPKQVKAN GLKKEELDVD ISAIRDIIRY YTREAGVRGL
ERQIAKVCRK VVKEHTGQKQ VKVKVASEQL EHLLGVRKFR YGLAEQQDQI GQVTGLAWTQ
VGGELLTIEA VVIPGKGQLI KTGSLGDVMV ESITAAQTVV RSRARSLGIA ADFHEKHDVH
IHMPEGATPK DGPSAGIGMC TALVSALTQI PVRADVAMTG EITLRGQVLA IGGLKEKLLA
AHRGGIKTVI IPEENVRDLK EIPENIKQDL QIKPVKWIDE VLQIALQYAP EPLPDVAPEI
VAKDEKRDGD AKERISTH