| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3458 |
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| Symbol | |
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| ID | 5192985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3861756 |
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| End bp | 3862625 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587906 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001268768 |
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| Protein GI | 148548666 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000291528 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTTCT TGGTTTTTTC AGAAAAACGC GCTTTTTGCT ATGCTGGCCG CCCCGCGGCA
CGAGATAGCA CCATGCAACT GATCGATATC GGCGTCAACC TGACCAACAG CAGTTTCCAC
GACCAACAGG CCGCAATCGT CGAGCGCGCG CTGGAGGCCG GCGTTACGCA AATGCTGCTG
ACAGGCACCA GCCTGGCGGT CAGCGAACAA GCCCTGGAAC TGTGCCAACA ACTGGATACA
AGCGGTGCCC ACCTGTTCGC CACGGCCGGC GTGCACCCTC ACGATGCCAA GGCCTGGGAT
GCCGACAGCG AGCGCCAGCT GCGACGGTTG CTGAGTGAAC CGCGCGTACG CGCGGTGGGC
GAATGCGGCC TGGATTTCAA CCGCGACTTT TCCCCTCGCC CGCTGCAGGA AAAAGCCTTG
GAAGCCCAGC TGACACTGGC TGCGGAGCTG CGCCTGCCGG TGTTCCTGCA CGAGCGCGAT
GCCAGCGAGC GCTTGCTGGC GATTCTTAAG GACTACCGCG ACCACCTGAC CGGCGCGGTG
GTGCACTGCT TCACCGGTGA GCGTGAGGCG CTGTTCGCTT ACCTGGACCT GGACCTGCAC
ATCGGCATTA CCGGCTGGAT CTGCGACGAA CGCCGCGGCA CCCATCTGCA CCCGCTGGTG
GGCAACATTC CTCAAGGCCG GCTGATGCTG GAAAGCGACG CGCCCTACCT GCTGCCGCGC
AGCTTGCGGC CCAAGCCCAA GAGCGGGCGC AACGAGCCGG CGTTCTTGCC GGAGGTACTG
CGCGAGGTGG CCTCGCATCG CGGTGAATCA GCCGAGCACA CGGCGGCGCA TACGACGGCA
ACGGCGCGGG CTTTCTTCCA GCTCCCCTGA
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| Protein sequence | MKFLVFSEKR AFCYAGRPAA RDSTMQLIDI GVNLTNSSFH DQQAAIVERA LEAGVTQMLL
TGTSLAVSEQ ALELCQQLDT SGAHLFATAG VHPHDAKAWD ADSERQLRRL LSEPRVRAVG
ECGLDFNRDF SPRPLQEKAL EAQLTLAAEL RLPVFLHERD ASERLLAILK DYRDHLTGAV
VHCFTGEREA LFAYLDLDLH IGITGWICDE RRGTHLHPLV GNIPQGRLML ESDAPYLLPR
SLRPKPKSGR NEPAFLPEVL REVASHRGES AEHTAAHTTA TARAFFQLP
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