| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3453 |
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| Symbol | |
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| ID | 5194612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3856096 |
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| End bp | 3858594 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640587901 |
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| Product | hypothetical protein |
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| Protein accession | YP_001268763 |
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| Protein GI | 148548661 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000113684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCGCTGT CCCGCCTGTG TGGCCTGGCA CTGCGCCAGT TGCTGCGCGA TGTTCGCGCC
AGTGAAGTGC GCGTGCTGTT CTTTGCCCTG TTGGTGGCGG TAGCTGCCAG CACCGCCATC
GGCTATTTCG GCGCCCGCCT AAACGGCGCC ATGCAGCTGC GCGCCAGCGA GTTCCTGGGC
GCCGATCTGG TACTGCAGGG CAGCGCCCCG GCCCGCGAGC AACAACTCGA TGCCGGCAAG
GCACTGGGCT TGCGCCATGC ACGCGTGGTC GAGTTCACCA GCGTGGTCGG CGGCGACAAT
GGCATCCAGC TGTCCAGCGT AAAGGCCGCC GACGGCGCCT ACCCGTTGCG CGGGCAAGTA
CGCAGCGCTC CGGCACCTTA TGCCGAAGAA ACACCCGGCG GCGGCCCTGC CCCTGGCGAA
GTGTGGGTCG AACCACGCCT GTTGGCAGCA CTGGGGCTGG CAATCGGCGA CAGCATCGAC
GTGGGCATGA AAACCCTGCG CATGAGCCGT GTGCTTACCT ACGAACCGGA CCGCGCCAAC
AACTTCTACA GCCTTACCCC GCGCGTGATG ATGAACCTGG CCGACCTGGA GGCCACCGGC
GTGATCCAGC CGGGCAGCCG GGTCACCTAC CGTGACCTGT GGCACGGCGA TGCCGAGGCG
CTGGCGCAGT ACCGTCAGGC CGTGGAAAAA GACCTGGCCG CCAACCAGCG CCTGCGTGAC
ACCCGTGATG GCAACCAACA GATCGGCGGC GCGCTGGGCA AAGCCGAACG CTACCTGAAC
ATGGCCAGCC TGGTGGCTGT ATTGCTGGCA GGCGTAGCCG TGGCACTGTC GGCCAGTCGC
TATGCTGCAC GCCGACTGGA CGCCAGTGCC CTGCTGCGCT GCCTGGGCCT GTCGCGCCAC
CAGGCATTGG GCCTGTATTG CCTGCAACTG GCCATGCTCG GCCTGGTCGC TGCCCTGGCC
GGCGCCTTGC TCGGCTGGCT GGCTCAGCTG GGCCTGTTCC GCCTGCTGCA CGGCTTGCTG
CCGAGCGTGG TGCCCGCTGG CGGCATCGTT CCTGCGCTGG CAGGTATCGG TACCGGGCTG
GTGGCACTGG CTGGCTTTGC CCTGCCGCCC ATTGCGGCGC TGGGCCAGGT GCCGCCACTG
CGCGTGCTGC GCCGTGACCT GCTGCCGATA CCTGCGAGCA GTTGGCTGGT GTACGGCGCC
GCCCTGCTCG CCCTGGGCCT GATCATGTGG CGCCTGAGCC TCGATCTGCT GCTCACCTTC
GCCCTGCTCG GTGGCGGCCT GGTCGCTGCA CTTCTGCTCG GCGGCCTGCT GTTGCTCGGT
TTACGCAGCC TGCGCCAGCT GCTGGCCGGT GCGCCACTCA CCTGGCGTCT GGGGCTGGGC
CAGCTATTGC GCCACCCCAT GGCGGCAGCA GGCCAGGCCC TGGCATTCGG CCTGATACTG
CTGGCCATGG CCTTGGTCGC CCTGCTGCGC GCAGAGCTGC TCGATACCTG GCAAGCACAG
CTACCCAAGG ATGCGCCCAA CCACTTCGCC CTGAACATCC TGCCAGATGA CCGTGAGCCG
TTCATCCAAC ACCTGCACCA GGTCAATGCC GCCTCAGCGC CGCTGTACCC GGTGACGCCC
GGGCGCCTGG TGCAAATCAA CGAAAAACCG GTACAGCAGG TGGTCAGCAA GGACTCGGCA
GGCGAGCGCG CCGTGCAGCG CGACCTCAGC CTGACCTGGG CCGCCGAGTT GCCCGAAGGC
AACGTGCTGA CCGCAGGCAG TTGGTGGCAA GCCTTGCCAG CCGACAACGA TATCCCCGGG
GTTTCGGTGG AGGCGGAACT GGCCAGCAGC CTGAAACTGC AGATGGGCGA CCTGCTGACG
TTCGATATTG GCGGCCAGCA GCGCCAGGCC CGCGTCAGCA GCCTGCGCAA CGTGCATTGG
GACAGCTTCC AGCCGAACTT CTACATGATC TTCCAGCCTG GCACGCTGCA GGGGCTGCCG
ACCACTTACC TGACCAGCTT CTACCTGGCA CTGGGGCATG ACCTGGATGT CGTCGCGCTG
TCACGGGCAT TTCCGGCGGT GACCATCCTG CAGGTGGATG CCTTGCTCGA CCAGCTGCGC
AGCATTCTCG CCCAGGTAAC CCTGGCGGTG GAGTATGTGC TGCTGTTCGT GCTGGCCGCG
GGGCTGGCAG TGTTGTTCGC TGGCTTGCAG GCCACGCTGG ACGAGCGCAT TCGCCAAGGC
GCACTGTTGC GCGCACTGGG CGCGGCGCGG CCCTTGCTGG TAAAAGCCCG ACGTATCGAG
TTCGGCCTGC TGGGCGCGGC CAGCGGGCTA TTGGCGGCCG TGGGCTGCGA ACTGATTACC
TGGGTGCTGT ACCGCTATGC CTTCGACTTG CAGTGGAGCC CGCACCCGTG GCTGCTGGTG
TTGCCGCTGA CAGGGGCATT GCTGGTAGGG GGTGCGGGGG TGCTGGGAAC GCGGCGGGCG
TTGAATGCCA GCCCGCTGGC GGTGTTGCGC GGGGCTTGA
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| Protein sequence | MPLSRLCGLA LRQLLRDVRA SEVRVLFFAL LVAVAASTAI GYFGARLNGA MQLRASEFLG
ADLVLQGSAP AREQQLDAGK ALGLRHARVV EFTSVVGGDN GIQLSSVKAA DGAYPLRGQV
RSAPAPYAEE TPGGGPAPGE VWVEPRLLAA LGLAIGDSID VGMKTLRMSR VLTYEPDRAN
NFYSLTPRVM MNLADLEATG VIQPGSRVTY RDLWHGDAEA LAQYRQAVEK DLAANQRLRD
TRDGNQQIGG ALGKAERYLN MASLVAVLLA GVAVALSASR YAARRLDASA LLRCLGLSRH
QALGLYCLQL AMLGLVAALA GALLGWLAQL GLFRLLHGLL PSVVPAGGIV PALAGIGTGL
VALAGFALPP IAALGQVPPL RVLRRDLLPI PASSWLVYGA ALLALGLIMW RLSLDLLLTF
ALLGGGLVAA LLLGGLLLLG LRSLRQLLAG APLTWRLGLG QLLRHPMAAA GQALAFGLIL
LAMALVALLR AELLDTWQAQ LPKDAPNHFA LNILPDDREP FIQHLHQVNA ASAPLYPVTP
GRLVQINEKP VQQVVSKDSA GERAVQRDLS LTWAAELPEG NVLTAGSWWQ ALPADNDIPG
VSVEAELASS LKLQMGDLLT FDIGGQQRQA RVSSLRNVHW DSFQPNFYMI FQPGTLQGLP
TTYLTSFYLA LGHDLDVVAL SRAFPAVTIL QVDALLDQLR SILAQVTLAV EYVLLFVLAA
GLAVLFAGLQ ATLDERIRQG ALLRALGAAR PLLVKARRIE FGLLGAASGL LAAVGCELIT
WVLYRYAFDL QWSPHPWLLV LPLTGALLVG GAGVLGTRRA LNASPLAVLR GA
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