| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3438 |
|---|
| Symbol | |
|---|
| ID | 5190484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3842514 |
|---|
| End bp | 3843068 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640587886 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001268748 |
|---|
| Protein GI | 148548646 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4067] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00573127 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0618334 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCGCG CCAGGAATAT GAGACTTACA CCCGTTTTAT TGCTGCTATG CCTCACCCTG
CTGCCGGCCC TTGGCCAGGC TGCGGGCAAG ACCGTGTATG GTCTCAACGA ATACGCACAT
CTGGGCGACC TGGACCTGGA AGTGGCCGCC AAGCTCGACA CCGGTGCCAA GACAGCCTCG
CTCAGCGCCC GCGACATCAA GCGGTTCAAG CGCAATGGCG AAAGCTGGGT ACGCTTCTAC
CTCGCCATCG ATGCGGCCCA TTCGCACCCG ATCGAACGGC CACTGGCACG CGTCAGCAAG
ATCAAGCGCC GGGCCGGCGA CTATGATGCC GAATCGGGCA AGGCCTATAC GGCCCGCCCG
GTCATCGAAC TCGAAATCTG CATGGGCCAG ACCAGGCGCA CCATCGAAGT CAACCTCACC
GACCGCAGCG CGTTCCAGTT CCCGCTGCTG ATCGGTTCCG AGGCGCTCAA GCACTTCGAC
GCACTGGTTG ACCCAAGCCT TAAATATGCG GCCGGCAAAC CTGCCTGTGC CACCGACGCT
CCCAAAGCAG AGTAA
|
|---|
| Protein sequence | MHRARNMRLT PVLLLLCLTL LPALGQAAGK TVYGLNEYAH LGDLDLEVAA KLDTGAKTAS
LSARDIKRFK RNGESWVRFY LAIDAAHSHP IERPLARVSK IKRRAGDYDA ESGKAYTARP
VIELEICMGQ TRRTIEVNLT DRSAFQFPLL IGSEALKHFD ALVDPSLKYA AGKPACATDA
PKAE
|
|---|
| |