| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3434 |
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| Symbol | |
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| ID | 5194971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3836684 |
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| End bp | 3839275 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587882 |
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| Product | aconitate hydratase |
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| Protein accession | YP_001268744 |
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| Protein GI | 148548642 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1048] Aconitase A |
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| TIGRFAM ID | [TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.070835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.23906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACA CTGCATACCG CAAGCACCTG CCAGGCACCG ACCTGGACTA CTTCGATGCC
CGCGCGGCGG TCGAGGCGAT CAAGCCCGGC ACCTACGACG GCTTGCCATA CACGTCCCGC
GTGCTCGCCG AGAACCTGGT GCGCCGCTGC GACCCTGCTT CGCTCGATGC CTCGCTGAGC
CAGCTGATCG AGCGCAAGCG CGACCTCGAC TTCCCGTGGT TCCCGGCCCG CGTGGTGTGC
CATGACATCC TTGGCCAGAC TGCGCTGGTC GACCTTGCCG GCCTGCGTGA CGCCATTGCC
GACAAAGGCG GCGACCCGGC CCAGGTCAAC CCGGTGGTGC CGGTGCAACT GATCGTCGAC
CACTCGCTGG CCGTCGAGTG CGGTGGTTTC GACCCGCAGG CCTTCGAAAA GAACCGCGCC
ATCGAAGACC GCCGCAACGA AGACCGCTTC CACTTCATCA ACTGGACCAA GAAGGCGTTC
AAGAACGTCG ACGTGATCCA GCCGGGCAAC GGCATCATGC ACCAGATCAA CCTGGAGAAG
ATGTCGCCGG TGGTCCACAG CGACCGCGGT GTCGCCTACC CGGACACCTG CGTCGGCACC
GACAGCCACA CGCCGCATGT CGATGCACTG GGTGTGATCG CCATCGGCGT AGGCGGCCTG
GAAGCCGAAA ACGTGATGCT CGGCCGCGCC TCCTGGATGC GCCTGCCGGA AATCGTCGGC
GTCGAGCTGA CTGGCAAACT GGCCCCGAAC ATCACCGCCA CCGACCTGGT ACTGGCCTTG
ACCGAATTCC TGCGCAAGCA GAAAGTGGTC GGCGCTTACC TGGAGTTCCA TGGCGAGGGT
GCTCGCGCCC TGACCTTGGG CGACCGCGCC ACCATTTCCA ACATGGCCCC GGAATACGGC
GCCACGGCGG CGATGTTCGC CATCGACCAG CAGACCATCG ACTACCTGCG CCTGACCGGC
CGTGAAGAGC AGCAGGTCAA GCTTGTGGAA ACCTACGCCA AGGCCACCGG CCTGTGGGCT
GACAGCCTGG GCGGCGCGGT CTACGAGCGT ACCCTGAGCT TCGACCTGTC GAGCGTGGTA
CGCAACATGG CCGGCCCGTC CAACCCGCAT GCTCGCGTCG CCACCAGCGA CCTGGCGGCC
AAAGGCATCG CCGGCAGCTG GGAAGAAGTG CCGGGGCAGA TGCCGGACGG CGCGGTGATC
ATCGCTGCCA TCACCAGTTG CACCAACACC AGCAACCCGC GCAACGTGAT TGCCGCAGGC
CTGATTGCGC GCAATGCCAA CAAGCTGGGC CTGACCCGCA AGCCATGGGT CAAGTCGTCG
CTGGCACCTG GCTCCAAGGC CGTGCAGCTG TACCTGGAGG AAGCAGGGCT GGAGAAGGAG
CTGGAGCAAC TGGGCTTTGG CATCGTCGCC TTCGCCTGCA CCACCTGCAA CGGTATGTCC
GGCGCCCTGG ACCCGGTGAT CCAGCAAGAA ATCATCGACC GCGACCTGTA CGCCACTGCC
GTGTTGTCGG GTAACCGCAA CTTCGACGGG CGTATCCACC CGTACGCGAA GCAGGCCTTC
CTAGCCTCGC CACCGCTGGT GGTGGCCTAT GCCATTGCCG GTACCATTCG TTTCGACATC
GAGAAGGATG TGCTGGGCGT GGTCGACGGC AAGGAAATCC GCCTCAAGGA CATCTGGCCC
AGCGACGAAG AAATCGATGC GGTGGTGCGT GCTGCGGTCA AGCCGGAGCA GTTCCGCAAG
GTCTACATCC CGATGTTCGC CATCGAGGAA GACCGCGGGC CAAAAGTTGC GCCGCTGTAT
GATTGGCGCC CGATGAGCAC CTACATCCGC CGCCCTCCCT ACTGGGAAGG GGCCCTGGCC
GGCGAGCGCA CCCTGCGCGG CATGCGTCCC CTGGCGGTGC TGCCGGACAA CATCACCACC
GACCACCTGT CGCCGTCCAA CGCGATCATG CTCGACAGCG CTGCGGGTGA GTACCTGGCG
AAAATGGGCC TGCCGGAAGA AGACTTCAAC TCCTACGCCA CCCACCGTGG CGACCACCTG
ACCGCCCAGC GCGCCACCTT CGCCAACCCA AAACTGTTCA ACGAAATGGT GCGCAACGAC
GATGGCAGCG TGAAGCAGGG CTCGCTGGCG CGTATCGAGC CGGAAGGCAA GGTTACCCGC
ATGTGGGAGG CGATCGAGAC CTACATGCAG CGCAAGCAGC CGCTGATTAT CGTTGCGGGT
GCCGACTACG GCCAGGGCTC GTCGCGCGAC TGGGCGGCCA AGGGCGTGCG CCTGGCGGGT
GTCGAGGCAA TTGTCGCCGA AGGCTTCGAG CGTATTCACC GCACCAATCT GGTAGGCATG
GGCGTGCTGC CGCTGGAGTT CAAGCCGGGC ACCGACCGCA AGACCCTGGG CCTGGATGGC
AGCGAAACCT ATGACGTGCT GGGGGCGCGT ACGCCACGGG CGACCCTGAC CCTGGTGGTT
ACCCGTGCCA ATGGTGAGCG CCTGGAAGTA CCGGTGACCT GCCGCCTGGA CACCGCCGAG
GAAGTGTCGA TCTACGAAGC GGGCGGGGTG CTGCAGCGCT TTGCCCAGGA CTTCCTCGAA
GCGACCGCCT GA
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| Protein sequence | MMNTAYRKHL PGTDLDYFDA RAAVEAIKPG TYDGLPYTSR VLAENLVRRC DPASLDASLS
QLIERKRDLD FPWFPARVVC HDILGQTALV DLAGLRDAIA DKGGDPAQVN PVVPVQLIVD
HSLAVECGGF DPQAFEKNRA IEDRRNEDRF HFINWTKKAF KNVDVIQPGN GIMHQINLEK
MSPVVHSDRG VAYPDTCVGT DSHTPHVDAL GVIAIGVGGL EAENVMLGRA SWMRLPEIVG
VELTGKLAPN ITATDLVLAL TEFLRKQKVV GAYLEFHGEG ARALTLGDRA TISNMAPEYG
ATAAMFAIDQ QTIDYLRLTG REEQQVKLVE TYAKATGLWA DSLGGAVYER TLSFDLSSVV
RNMAGPSNPH ARVATSDLAA KGIAGSWEEV PGQMPDGAVI IAAITSCTNT SNPRNVIAAG
LIARNANKLG LTRKPWVKSS LAPGSKAVQL YLEEAGLEKE LEQLGFGIVA FACTTCNGMS
GALDPVIQQE IIDRDLYATA VLSGNRNFDG RIHPYAKQAF LASPPLVVAY AIAGTIRFDI
EKDVLGVVDG KEIRLKDIWP SDEEIDAVVR AAVKPEQFRK VYIPMFAIEE DRGPKVAPLY
DWRPMSTYIR RPPYWEGALA GERTLRGMRP LAVLPDNITT DHLSPSNAIM LDSAAGEYLA
KMGLPEEDFN SYATHRGDHL TAQRATFANP KLFNEMVRND DGSVKQGSLA RIEPEGKVTR
MWEAIETYMQ RKQPLIIVAG ADYGQGSSRD WAAKGVRLAG VEAIVAEGFE RIHRTNLVGM
GVLPLEFKPG TDRKTLGLDG SETYDVLGAR TPRATLTLVV TRANGERLEV PVTCRLDTAE
EVSIYEAGGV LQRFAQDFLE ATA
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