Gene Pput_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3400 
Symbol 
ID5194396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3815143 
End bp3815547 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content48% 
IMG OID640587848 
Producthypothetical protein 
Protein accessionYP_001268710 
Protein GI148548608 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000848695 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATAG TCACCAGGAG AGCTACTGTC CTTGTCCCGT CTGGGACTGT TGAACGACCC 
GACCTAAAGC ACCTGTACAT CCTGCTCAAT GACCCATCAG GCAAGGATAA ACTGGTGCTG
ATGGTTAGCA TATCGACCGT CCATCCCGAA AAATACCACG ACCCTACTTG TATTCTTGAG
CCTGGCGACC ACTCATTCAT TCGCTCAAAA AGCTACGTAA TGTACTCGAT GGCTCGCATA
GAGAGCGTCA AGACGCTTGA GAATGGCGTG GCGCAAAATC TGCTCATCCC CAAAGAGCCA
ATGGCTGCGG AAGTATTTAC ACGTATTTGC CAAGGAGTCC TAGATTCCAA AAGGACTCCA
ATAGAGCTCA AACGATTCTT CGAGCCTATC TGGAAAAAAA TCTAG
 
Protein sequence
MFIVTRRATV LVPSGTVERP DLKHLYILLN DPSGKDKLVL MVSISTVHPE KYHDPTCILE 
PGDHSFIRSK SYVMYSMARI ESVKTLENGV AQNLLIPKEP MAAEVFTRIC QGVLDSKRTP
IELKRFFEPI WKKI