Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3400 |
Symbol | |
ID | 5194396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3815143 |
End bp | 3815547 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640587848 |
Product | hypothetical protein |
Protein accession | YP_001268710 |
Protein GI | 148548608 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000848695 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCATAG TCACCAGGAG AGCTACTGTC CTTGTCCCGT CTGGGACTGT TGAACGACCC GACCTAAAGC ACCTGTACAT CCTGCTCAAT GACCCATCAG GCAAGGATAA ACTGGTGCTG ATGGTTAGCA TATCGACCGT CCATCCCGAA AAATACCACG ACCCTACTTG TATTCTTGAG CCTGGCGACC ACTCATTCAT TCGCTCAAAA AGCTACGTAA TGTACTCGAT GGCTCGCATA GAGAGCGTCA AGACGCTTGA GAATGGCGTG GCGCAAAATC TGCTCATCCC CAAAGAGCCA ATGGCTGCGG AAGTATTTAC ACGTATTTGC CAAGGAGTCC TAGATTCCAA AAGGACTCCA ATAGAGCTCA AACGATTCTT CGAGCCTATC TGGAAAAAAA TCTAG
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Protein sequence | MFIVTRRATV LVPSGTVERP DLKHLYILLN DPSGKDKLVL MVSISTVHPE KYHDPTCILE PGDHSFIRSK SYVMYSMARI ESVKTLENGV AQNLLIPKEP MAAEVFTRIC QGVLDSKRTP IELKRFFEPI WKKI
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