Gene Pput_3397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3397 
Symbol 
ID5193659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3813118 
End bp3813366 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content60% 
IMG OID640587845 
Producthypothetical protein 
Protein accessionYP_001268707 
Protein GI148548605 
COG category[S] Function unknown 
COG ID[COG4197] Uncharacterized protein conserved in bacteria, prophage-related 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00283692 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAG CAGAAGCAGC CAAAGAAGCA TCCCGCGTGC TGGGCAGCCA GGCGGAATTG 
GCGCGCCGGC TGAATGTTGC GGCACCCACC GTCAACCAAT GGTGTTCAGG AGAGCGCACG
GTCCCAGCCA AGCGCGCATT ACAGATTGAG GCGCTTACGA ATGGCGCCGT GAATCGTGCC
GACCTGTGTC CTTCGTTCCC ATGGAACCAG ATCGACAGTA ACCCGACCCA CGCGCTTTCC
GCCGCTTAA
 
Protein sequence
MKSAEAAKEA SRVLGSQAEL ARRLNVAAPT VNQWCSGERT VPAKRALQIE ALTNGAVNRA 
DLCPSFPWNQ IDSNPTHALS AA