Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3394 |
Symbol | |
ID | 5191869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3811043 |
End bp | 3811819 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640587842 |
Product | hypothetical protein |
Protein accession | YP_001268704 |
Protein GI | 148548602 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000160878 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCCC GCATTCGCAC TATCAAGCCT GAATTCTGGT CGAGCGAGCA GGTTATGTCC TGCCGACCGC TCGCTAGGCT CCTGTTCATC GGCCTTTGGA ACTTCTGCGA TGACGGAGGT AATCACCCGC TGGCCGCGCG CACGATCAAG GCCCTGGTGT TCCCCGGTGA CGACATAACC ACGGAGGAGG TAAGCGCGCT CCTTGGCGAA CTGGAAGGGG CCGAGCTGAC CCGCAGCTAC TGGGCAGCAG GCAAGAACTA TCTGCACATC TGCGGCTGGA AGCACCAGAA GATCGAGAAA AAGAACTTCA AATACCCAGC TCCTCCCGCA GAAATCGAAG ATGGGTCGGA GAGTGGTCGT CGACAATTCG CCGAGGAGTC GCCGACTGGT CGCCGACCGG TTGACCCCGG AAGGGAAGGG AATGGAAGGG AAGAACACAA CACTCAACGC GCGGGCGAGG AATCCGGCGT TGACCCAAAG CTGCCGACCG AGATGGACCT TGAGTGGAAG CCTGACGACA AGCTGCTGAA AGCCTACGCA AAGCGCATGG GTATCCCTGT CGACCTGTTC ACCGATGAAG CGACCGCCGC ATTCGTTTGC CACTACTCGG CATCCGGGCG CTGTGAGACC CAGGCCTCGT GGGTGAGCCT GTTGGTCAAG TGGGTGAAGC GTGACATGGC CACCGCCAGT AATGTTCGGC CATTCCCAGT GAAGCGTCAG GCCAATGGCC CGGACTTCAG CGACACGTCA TGGGCTGACG ACTTGGGTGA CCTATGA
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Protein sequence | MMARIRTIKP EFWSSEQVMS CRPLARLLFI GLWNFCDDGG NHPLAARTIK ALVFPGDDIT TEEVSALLGE LEGAELTRSY WAAGKNYLHI CGWKHQKIEK KNFKYPAPPA EIEDGSESGR RQFAEESPTG RRPVDPGREG NGREEHNTQR AGEESGVDPK LPTEMDLEWK PDDKLLKAYA KRMGIPVDLF TDEATAAFVC HYSASGRCET QASWVSLLVK WVKRDMATAS NVRPFPVKRQ ANGPDFSDTS WADDLGDL
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