| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3393 |
|---|
| Symbol | |
|---|
| ID | 5191868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3810285 |
|---|
| End bp | 3811046 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640587841 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001268703 |
|---|
| Protein GI | 148548601 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000119409 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC AACAGAAACT GCGCAGCGTG ACGCAGATCA TGGCCACGGC CCGAAACCTG
CCCGCCGAGG TGCAGGGCCC GGCCAAGCAG CTGGACCCAG GCACCACCGA AGTGGTCAAC
GCCCTGTTCA AGGAACTGCA GGCCATCTTC CCGGCGTGGA AGCAGGCCTG GCCGGACGAT
GACGCGCTGA AGGCTGCCAA GCGCAGCTGG ATCAAGTCCT TCGTCGCCGC GGGCATCAAC
ACCCTGGAGC AGATCCGCTT CGGCATCCAG AAGTGCCGGG TGCTGGGCAC CGACTTCGCC
CCGAGCAGCG GCAAGTTCAT CAAGCTGTGC CAGCCGACGC CGGAAGAGAT GGGCATCCCG
CCGCTTGCGC TGGCCCTGGC AGAGGCGCTG GAGAACTTCC ACCCCAGCAG GGCGGGTTCC
CGCACCTGGT CGCACGCAGC GGTGCGCCAC GCGGCCCTGC AGTGCGAGGC GCAGAACCTG
GGGTCGATGG AGGTCGAGCG CGCCGAGAAG GTATTCGCCC GCGCCTACGA CATCACCATC
CGCATGCTGG TGGCCGGCGA GCCACTTGGC GACATCGCCA CCGGCATCGG TCACGACAGC
CAGAAGAGCC TGATCGAGCT GGCCGATGAA TACGCCAGCC AGCGCCAGGC CCGCCTGCTG
GACCTGCAGC AGATCCCTTC GAGCGCCGCC GCGTGCCGTG CACACCTGCT GGCCAAGTTG
AACATCAAGC GCGCCGGGCA GCCGGCCGGG GAGGGGGTGT GA
|
|---|
| Protein sequence | MTTQQKLRSV TQIMATARNL PAEVQGPAKQ LDPGTTEVVN ALFKELQAIF PAWKQAWPDD
DALKAAKRSW IKSFVAAGIN TLEQIRFGIQ KCRVLGTDFA PSSGKFIKLC QPTPEEMGIP
PLALALAEAL ENFHPSRAGS RTWSHAAVRH AALQCEAQNL GSMEVERAEK VFARAYDITI
RMLVAGEPLG DIATGIGHDS QKSLIELADE YASQRQARLL DLQQIPSSAA ACRAHLLAKL
NIKRAGQPAG EGV
|
|---|
| |