| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3383 |
|---|
| Symbol | |
|---|
| ID | 5190439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3805620 |
|---|
| End bp | 3806057 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640587831 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001268693 |
|---|
| Protein GI | 148548591 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0689756 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA TCGCCTACAA GGATGGCGTG ATCGCCTACG ACTCGCAGAT CACTCGTGGA
GACGTAATCG TCTACGACGA CTATGAAAAG TGCCTGACCC GTGATGGCGT GCGCTTCTTC
TGTTCGGGTG CGACGCCAGA CTTCCCGGTG CTGGTTGACG TCTACTTTGG CGCAAAGCCT
GCCGGGCCAG TCGATGTGAC GGCCATGGTG CTCGATGGTG AGAGCCTGAT GCTCGTGGCG
ATCGACAATG ACACGGGCCT TTGGAAGTCG CCGATCATGC GCGACAGGCC GTATGCCATA
GGCAGCGGGA CGCCATTCGC TTTCGCTGCC ATGGATATGG GGGCATCTGC CGAAAAGGCC
GTCGAGATGG CGGCAAGGCG GGATACCGGC ACTGGCGGGA AGATCAGAAC ACTAAGGATT
GGCGAGCTGG TAGGGTAG
|
|---|
| Protein sequence | MTTIAYKDGV IAYDSQITRG DVIVYDDYEK CLTRDGVRFF CSGATPDFPV LVDVYFGAKP
AGPVDVTAMV LDGESLMLVA IDNDTGLWKS PIMRDRPYAI GSGTPFAFAA MDMGASAEKA
VEMAARRDTG TGGKIRTLRI GELVG
|
|---|
| |