| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3380 |
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| Symbol | |
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| ID | 5192340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3802923 |
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| End bp | 3804224 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640587828 |
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| Product | hypothetical protein |
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| Protein accession | YP_001268690 |
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| Protein GI | 148548588 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01547] phage terminase, large subunit, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.835336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCAC TTAACGTGCC TCAAGCCAGC TTCCTGCGCA TGGAGAACAA GTTCCGCGGC
TTCGTCGCCG GGTTCGGCTC AGGCAAGACT TGGGTGGGCT GCGCCGCGCT GTGCAAGCAT
GTGTGGGAAT GGCCACGGAT CGACTCCGGC TACTTCGCCC CGACTTACCC GCAGATCCGT
GACATCTTCT TCCCGACCAT CGAGGAGGTC GCCTTCGACT GGGGCCTGAA GGTCAAGACG
AAGGAGAGCG ACAAGGAGGT CGAGTTCTAC AGCGGCGGCC AGTACCGCAG CACGACCATC
TGCCGCTCTA TGGAGAAGCC GCAGACCATT GTCGGCTTCA AGATCGGGCA CGCCCTTGTC
GACGAACTCG ACGTTCTGCC CGCGCTGAAG GCTGAACACG CCTGGCGCAA GATCATTGCC
CGGATGCGCT ACAACGTGCC CGGGTTGAAG AACGGCGTTG ACGTGACCAC CACCCCTGAG
GGGTTCAAGT TCGTCTATCA GCAGTTCGTG AAGCAGTTGC GCGAGAAGCC GGCCCTGCAG
GGTATGTACG GCCTGGTGCA GGCCAGCACG TTCGACAACG AACTGAACCT GCCGCCGGAC
TACATCCCAT CGCTGATGGA GTCGTACCCA GCACAGCTGA TCCTGGCGTA CCTGAATGGC
CAGTTCGTCA ACCTGAACGC CGGGTCGATC TACCACGCCT ACGACCGGAA GCTGAATTCC
TGCTTCGATA CCGTAGAGCC TGGTGAGCCC TTGTTTATCG GTATGGACTT CAACGTCGGC
AAGATGGCGG CGATTGTCCA TGTCAAACGG CCTGACGGAA AGCCCAGGGC AGTGGATGAG
CTGATAGACG GCTTCGACAC CCCGGACATG ATCCGGCGCA TCAAGGAGCG CTACTGGCGG
CACAACGGCA ACACGTACGA GAAGACCTGC GAGATCAGGA TCTACCCGGA CGCCTCGGGC
GGGTCGCGCA AGTCGGTCAA TGCCAGCGAG ACGGACATCG CCATCCTGCG TCAGGCCGGG
TTCAGCGTGA TCGCCCCCGA TGCCAACCCA CCGGTTAAAG ACCGCATCAA CGCCATGAAC
GCGATGTTCT GCAACGCGAA TGGCGAGCGC CGCTACCTGA TTAACCCGCT GCGCTGCCCG
ACCTACGCGG ATGGCTTGGA GCAGCAGGTG TGGGCGCCCA ATGGCGAGCC CGACAAGAAA
TCTGGCGTCG ACCACGCGAA CGACGCCGGC GGCTACTTCA TCCACCACGA CTATCCGATC
AGCAGGCCGG TTACTCACGT GCCGATCTCG TTCACTTTCT GA
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| Protein sequence | MPSLNVPQAS FLRMENKFRG FVAGFGSGKT WVGCAALCKH VWEWPRIDSG YFAPTYPQIR
DIFFPTIEEV AFDWGLKVKT KESDKEVEFY SGGQYRSTTI CRSMEKPQTI VGFKIGHALV
DELDVLPALK AEHAWRKIIA RMRYNVPGLK NGVDVTTTPE GFKFVYQQFV KQLREKPALQ
GMYGLVQAST FDNELNLPPD YIPSLMESYP AQLILAYLNG QFVNLNAGSI YHAYDRKLNS
CFDTVEPGEP LFIGMDFNVG KMAAIVHVKR PDGKPRAVDE LIDGFDTPDM IRRIKERYWR
HNGNTYEKTC EIRIYPDASG GSRKSVNASE TDIAILRQAG FSVIAPDANP PVKDRINAMN
AMFCNANGER RYLINPLRCP TYADGLEQQV WAPNGEPDKK SGVDHANDAG GYFIHHDYPI
SRPVTHVPIS FTF
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