Gene Pput_3362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3362 
Symbol 
ID5194276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3784255 
End bp3786192 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content62% 
IMG OID640587810 
Producthypothetical protein 
Protein accessionYP_001268672 
Protein GI148548570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.621947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCC AACAGACCAT TCAGGAGCTG GACCGGATTG TCGGGACGAC GAACGAGCTA 
CTGCTGTCGC CCGAAGTGAA GATGATGGAC GTTGGTGGAG GCGTGATGCG CCCGACCAAC
GCCATGGTGA TGACCAACCT AGCCACCCTC CTGGGCGGGG CCATGCCCTA TGCCTCTGTC
GCCCTTGGCC TATCCGGGAC TGCCGACGGC ACCAACTTCA GCGTGCTTTC TAGCGCCCAG
GACGAATACG TCAATGTTTA TCGGAACGAA AGTGGTTCTG CTGTGTTCGT CGATAGCTAT
CCGAACGCTA GCGCTACGCA ACGGGCCAGC GGCCTGGCAG AAACGGCTTA CAGCCTGGTG
TATCCGCAAT CGCTGGATCA GGACATGCCA TGGTCCATCG TCGATCAGTA CTTCCGGGCG
ATTCTCGGCG TCAAGAGTAA TGGTGCGGCG CATGCTCTGC TGGATAAGCT GCCCGGCCTC
GACCTGCTAG GCGATTATGC CTGGGCGGTG ACCGACATCA ACGGAGTGGT GCTGCTGGGC
ATCAAGTGGT CTGGGGAGGT CGTGGTTCAT GGCCTGAGCA CCGGCGCCGT GAGTGCATTT
GCTGATGGCC CGATTGGCGG CCAGGATATC TGGGTGCTTG TCGATGGCGT GCCGTACCAG
GTCACGTCGA GCGGCGATAA CTTCTCGCCG CAGGTGTCCA GCGGCCGGCT CAGCTATATC
CGCCGCAGCG GGTCAGTCTC CTCGGTGACA GTCGATGTAC CGCTGCCCGG CTCGGTAGCC
CCTTTCGTCA CCACCTTGCT GCACATCGTC AGCTCCGGCC AGTCACTTTC GATGGGCGCG
ACTGCCGCGC CAACCACCTT GCAGCCGCCG ACTGCGAACC GCCTTCTGAC TCTGCAGGAC
GGGGTGCGGC TGACCAACCA GGACGATACC CTCACGGCAG CCATGGTGGC GCCCTTCAAG
CCGCTAGTAG CCAAGACCAA CGAAGTGCCG GCCGTTCAGC TGGCCGCGCA GCTCAACCGG
ACCCGCGGTA TCCCGAGTAA TGCCGGTTTG TTGGTCAGCT GTCACGGCCG AGGCGGCTAC
GCGATCGCTG CCTTGAGCAA GGGCACGTTG CCGTATACCA ACTCGATCAC CGCCGTGACC
AACGCCAAGG CTGAGGCCGT TCGTTTGGGG TTGGGTTACC GGGTGCCGTT CGTTGACTGG
ATTCAGGGTG AGAACGACGC CAACCGGGCC CAGGGGGTTT ACCTGGCGGC TCTGTTACAG
CTGCAGACCG ACTATGACAC CGACATTCGT GCAATCAGCG CCCAGCCGCA GACGGTGCCA
TTGCTGCTCG ACCAGATCAG CAACTGGACG ATGTACAGCA CGGCCACCAG CTTCGTCCCC
TTGGAGCAGC TGCAGGCGGC GCTGACCTAC CCGACGCGCT TCTATTGCGC CGGGCCCAAG
TACTGGCTGC AGACCAATGC CGATGGGATT CACCTGGCAG CAGAGAACTC GATGCGCCTT
GGCGTCATGC ATGAGCGTGC TGCTCAGGCG ATCATCGACG GCCATTCTTG GAAGCCAACC
CATGCGGTGT CGGCTACTAG GGTTGGCGTC GTGGTAACGC TGCGCTTCCA TACCCCATCC
GGCCCGCTGG TAATCGATAC CGTAAACGTC ACCGACCCGG GCAACCTGGG TATCCGTTAC
GTTGATGACT CCGGCGTGGC CACTATCCAA AGCGTGAAGC TGCTTGGCGA TAACACCCTC
GAAGTCACGC TGAGTGCAGT CCCCACAGGG GCAAACCCAT ACGTTGGCAT TGCCGATATC
GGCACCGTGG GCGCCGCAGG TGGTCCGGTT ACCGGTCCGC GCGCATGCCT GCGCGACAGC
AGCACTGACC TCGATGGCTA CGGCCAGCCT GTCTATAACT GGGCCTGTCA CCAGCGTATC
GCTGTACAGG CCGCATAA
 
Protein sequence
MSGQQTIQEL DRIVGTTNEL LLSPEVKMMD VGGGVMRPTN AMVMTNLATL LGGAMPYASV 
ALGLSGTADG TNFSVLSSAQ DEYVNVYRNE SGSAVFVDSY PNASATQRAS GLAETAYSLV
YPQSLDQDMP WSIVDQYFRA ILGVKSNGAA HALLDKLPGL DLLGDYAWAV TDINGVVLLG
IKWSGEVVVH GLSTGAVSAF ADGPIGGQDI WVLVDGVPYQ VTSSGDNFSP QVSSGRLSYI
RRSGSVSSVT VDVPLPGSVA PFVTTLLHIV SSGQSLSMGA TAAPTTLQPP TANRLLTLQD
GVRLTNQDDT LTAAMVAPFK PLVAKTNEVP AVQLAAQLNR TRGIPSNAGL LVSCHGRGGY
AIAALSKGTL PYTNSITAVT NAKAEAVRLG LGYRVPFVDW IQGENDANRA QGVYLAALLQ
LQTDYDTDIR AISAQPQTVP LLLDQISNWT MYSTATSFVP LEQLQAALTY PTRFYCAGPK
YWLQTNADGI HLAAENSMRL GVMHERAAQA IIDGHSWKPT HAVSATRVGV VVTLRFHTPS
GPLVIDTVNV TDPGNLGIRY VDDSGVATIQ SVKLLGDNTL EVTLSAVPTG ANPYVGIADI
GTVGAAGGPV TGPRACLRDS STDLDGYGQP VYNWACHQRI AVQAA