Gene Pput_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3350 
Symbol 
ID5193072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3776084 
End bp3776398 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content61% 
IMG OID640587798 
Productpeptidase 
Protein accessionYP_001268660 
Protein GI148548558 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCATG TATCCCGGAC GGCACGTTAC CTGGCGCTCT CGCTGCTTGC CGTCTGCTCC 
CTGGCTGTTG CCCGCGACCT GGACCAGGAT GAAGCCCTGA AGCTCCGTCA GAAGGGCATC
ATACTGCCGC TCGAACAACT GCTCGAGACC GCCCTGGGGC GTCACCCCGG GGCGCGTCTG
CTGGAAGCCG AGCTGGAAGA AGACGATGAT CGCTACGAAT ATGAAGTCGA GTTGCTGACG
ACTGAAGGTG TGGTACGCGA GATCAAGCTC GATGCCAGCA CCGGCGCCCT GCTCAAAGAC
GAGGAAGATG ACTGA
 
Protein sequence
MIHVSRTARY LALSLLAVCS LAVARDLDQD EALKLRQKGI ILPLEQLLET ALGRHPGARL 
LEAELEEDDD RYEYEVELLT TEGVVREIKL DASTGALLKD EEDD