| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3345 |
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| Symbol | |
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| ID | 5194181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3769715 |
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| End bp | 3771604 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587793 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001268655 |
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| Protein GI | 148548553 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTACC AGCACAGCTA CGCCCACTCC ATTTCCGACC CTGCCGCGTT CTGGGCGGAA
CAGGCCGCAC ACCTGGCCTG GCACCGCAAG CCTGCCTTGA CCCTGCAAGA CAATGCCGAC
GGTACCCACC GCTGGTTCGC TGACGGCCGC CTCAACAGCT GTTACCTGGC CCTCGATCAC
CAGATCGAGC AGGGCCGGGG CGAGCAGTTG GCGCTGATCT ACGATTCGCC AGTGACCGGC
GTGCAGCAGA CCTACACCTA CAACCAGTTG CGCGACGAGG TAGCACGCCT GGCCGGTTTG
CTGCGCCAGC TGGGGGTGAA CAAGGGCGAT GGGGTGATCA TCTACATGCC CATGGTGCCG
CAGGCGGCCA TGGCGATGCT GGCCTGCGCG CGGATTGGCG CCGTGCATTC GGTGGTGTTC
GGTGGCTTTG CTGCCAACGA GTTGGCCTTG CGCATCGATG ACGCCCGGCC CGCCTTGTTG
CTGACGGCTT CGTGCGGCCT GGAGTTCGAT CGGGTCATAG CCTATAAGCC GCTGGTTGAC
CGCGCCCTGC AACTGGCCCG GCACCAGCCG CGCAATGTGC TGGTACTGCA GCGGCCGCAG
GCGCATGCCG AACTGCTGCC GGGCCGCGAC CTGGACTGGC AGGCGGCCTT GGCCGGCGCA
GAACCGGTGG CGCCAGTCGA ACTCGATGCC GGCGACCCGC TGTACATCAT GTACACATCG
GGCACCACCG GCAAACCCAA GGGTATCGTC CGGGAAAACG GCGGCAATGC CGTGGCGCTG
TGTTATGCCA TGCGCCATAT CTATGGCATG CAGGCTGGCG ATGTGTGGTG GGGCATATCC
GACGTCGGTT GGGTGGTCGG CCATTCACTG ATCGTCTACG GGCCGTTGAT GAGCGGCTGT
ACCACCGTCT TCTACGAAGG CAAGCCGATC CGTACCCCGG ACGCTTCGGC CTACTGGCGG
GTGGTTGAGC AGTACCAGGT CAACGCGCTG TTCTGTGCAC CGACGGCCAT GCGCGCCATC
CGCAAGGAAG ATCCGGAGGG CGAACTGATT CGCAAACATG ACCTCCGCTC GCTGCGTCAA
CTATTCCTGG CGGGGGAAAA GCTCGATTCC AGCACCCATG AATGGCTGGA GCGGGTAAGT
GGCAAACCGG TGCACGACCA CTGGTGGCAG ACTGAGACCG GCTGGCCGGT CACCGCGCCG
TGCGTCGGGT TGGAGGGCAG CGCCGCGAAG CCAGGGTCGA GCAACCGGGC GGTGCCTGGC
TACAACGTTC GCGTGCTGGA TGACGAAGGC CACTTGCTCG GGCCTAACCA TCAGGGGGCG
ATCGTGATTG CCCTGCCATT GCCACCTGGT TGCAGTCAGA CGCTGTGGGG TGATCACGAA
CGCTACCTGC AGGCCTACCT GCACACATAT CCGGGTTACT ACCACACGGG CGATGGCGGC
TATCTGGATG ACGAAGGCTT TGTCTACATC ATGGGTCGCA CCGATGATGT GATCAACGTG
TCCGGGCATC GACTTTCCAC GGGTGAGATG GAGGACTTGG TGGCGCGCCA TCCGGCGGTG
GCCGAGTGCG CGGTGATCGG CGTGCACGAC GAGATCAAGG GCCAGGTGCC GTTGGCGCTG
GTGGTGCTCA AGGACGGCGA GGGCATTGCC GAAGCTCAGC TGCTGGTGGA CCTGGTAGGC
CGTGTGCGCG ATGAGATCGG CCCACTGGCC TGTTTCAACC AGGTGCGGTT GGTGAAACGC
TTGCCCAAGA CCCGCTCTGG CAAGATTCTG CGGGCGGTGC TGCGCAAGAT TGCCGATGGG
CAGGATTATG TGCCGCCTTC GACCCTGGAT GACCCGGCAG TGCTGGGCGA GATTGAAGCG
GTGCTGGCGG ATTTGCCCAG GGCGGGGTAA
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| Protein sequence | MSYQHSYAHS ISDPAAFWAE QAAHLAWHRK PALTLQDNAD GTHRWFADGR LNSCYLALDH
QIEQGRGEQL ALIYDSPVTG VQQTYTYNQL RDEVARLAGL LRQLGVNKGD GVIIYMPMVP
QAAMAMLACA RIGAVHSVVF GGFAANELAL RIDDARPALL LTASCGLEFD RVIAYKPLVD
RALQLARHQP RNVLVLQRPQ AHAELLPGRD LDWQAALAGA EPVAPVELDA GDPLYIMYTS
GTTGKPKGIV RENGGNAVAL CYAMRHIYGM QAGDVWWGIS DVGWVVGHSL IVYGPLMSGC
TTVFYEGKPI RTPDASAYWR VVEQYQVNAL FCAPTAMRAI RKEDPEGELI RKHDLRSLRQ
LFLAGEKLDS STHEWLERVS GKPVHDHWWQ TETGWPVTAP CVGLEGSAAK PGSSNRAVPG
YNVRVLDDEG HLLGPNHQGA IVIALPLPPG CSQTLWGDHE RYLQAYLHTY PGYYHTGDGG
YLDDEGFVYI MGRTDDVINV SGHRLSTGEM EDLVARHPAV AECAVIGVHD EIKGQVPLAL
VVLKDGEGIA EAQLLVDLVG RVRDEIGPLA CFNQVRLVKR LPKTRSGKIL RAVLRKIADG
QDYVPPSTLD DPAVLGEIEA VLADLPRAG
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