| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3344 |
|---|
| Symbol | |
|---|
| ID | 5191891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3768400 |
|---|
| End bp | 3769626 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640587792 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001268654 |
|---|
| Protein GI | 148548552 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.844152 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACGA AACAAGAAGC ATGGACCCGT ATTGATCTTC AACTGCCTGA TGACATCCGA
AACGAAATCG TCTACCGCCC GCCTTATCTG GTAGAGGGTT TCTTCTACAG TTGCTGGGCC
TCGCGGGACC GTCTGGGTGA ACCCACAACG GTAGTTACCA AGCTTACGCC CGATGGCAGG
GCAGTCGAGG CATTTGGCGA CAACGGCACC GTACGCATCC CTATGCCAGG GGAATGGGGC
GACTACTTCT GCTTCGTTGT CGACGGCGAA CACCTCCTTT GCGGTGTAGC GCTTCGGAGC
TCCGATAACT TTGCCATTTT CCGCCTGAAC AAGGCGTCAG GCGCCATGGA TATCGATTTC
GGCCACCAGG GATATAAAAT ACATCCTTAT CCAGTCGAGC CAGACGACAC CTCAGAGGCA
GCCCAGCCAA GGCTTGATGG TGCTGAGGGT TATGCGGGCA GCGTGCCGCA ATTCCCGGAT
GGTAAACTCC GCCAGATGGT CAACTCCGGG CTCGCACAGT TCGATATGCA AGGCAATCTG
GATACCTCCT TCAATGAAGT AGGTATGCGC AGGCACTTCC GTTGGCAAGG CCGCGCTCTA
CAGACACTTG CCGTAAACGC CCGTTACCGC GGTACTGAAC ATGCTGGCTT CCATTATTGC
GGCGACCACC GCGTGGGCGG TGATGAAACG CAGGCATGGG TTGGAGCATG CGACAAGAAC
GGCGCCGTGT TATCGGGCTT TGCCGAGCAA GGCATCTGGA TTGTCAAACG CCTGCCCGGC
CATCCAGATC TCGCTTATAT TGCCGTACAC GCTACCACTC AAGCCCACGA CCGCCTTTAT
CTGACAGGCA ACGCTGGTAC CGGCACCAAC CAAAGTGGCT TTGTACACTG CCTGAAACTG
GACGGCACCG TGGACAATCG CTTCAACGAT GGCCAGGCCA TCATTTTCAA ACGACCTGAA
TTCGAGCGGA CAATCGCATT CGCGCTCACG CCGCATGGCA GCGGCGTCCT GGTGGGCTGC
CGCGCGGTGT CCCCAATCGA AGATCAGATG CCAATCGCCA TCGTTCGACT GGACGAAAAT
GGCCATGTGG ATACCGCATT CGGTGACCAA GGCTGGTTGA TCACGCCTGA ATACCCCGAG
CCCTATACCC TGCTCACCTT GACTTACGAA GACCAGGAAA TCATAGAGCT GAGGGGCAAG
GAGTTCATTG CCCGCCACCC CTTGTAA
|
|---|
| Protein sequence | MITKQEAWTR IDLQLPDDIR NEIVYRPPYL VEGFFYSCWA SRDRLGEPTT VVTKLTPDGR
AVEAFGDNGT VRIPMPGEWG DYFCFVVDGE HLLCGVALRS SDNFAIFRLN KASGAMDIDF
GHQGYKIHPY PVEPDDTSEA AQPRLDGAEG YAGSVPQFPD GKLRQMVNSG LAQFDMQGNL
DTSFNEVGMR RHFRWQGRAL QTLAVNARYR GTEHAGFHYC GDHRVGGDET QAWVGACDKN
GAVLSGFAEQ GIWIVKRLPG HPDLAYIAVH ATTQAHDRLY LTGNAGTGTN QSGFVHCLKL
DGTVDNRFND GQAIIFKRPE FERTIAFALT PHGSGVLVGC RAVSPIEDQM PIAIVRLDEN
GHVDTAFGDQ GWLITPEYPE PYTLLTLTYE DQEIIELRGK EFIARHPL
|
|---|
| |