| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3339 |
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| Symbol | |
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| ID | 5195332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3761266 |
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| End bp | 3763512 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587786 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001268649 |
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| Protein GI | 148548547 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAG ACAACTCACT GGCAGACGCC ATGGAGCGCT GTGCCCAGGA GCCGATCCAG
GTTCCGGGCA GCATCCAGCC TCACGGCTTT CTGCTGGTGC TGGATGCCAC CGACCTGTGC
GTGCTGCAGG CCAGTGAAAA TGTCGAGCAC TGGTTGGGCT TGCCAGCCCG CGAACTGATC
GGTTGCCACT TCGCCGACCT GGTTCACGAG GGCTTTGACC TGCACGCGCA CCTCACACGG
CTTCCCGAAG ACGAAGTCTT CCCCTTCCAC ATTGGCGACG TGCGCTTGCG CCAGGGCGCA
CCCATCAGTG CCCAGCTGCA CATGCTGGTC CATTGCCACG ATCAGGTACT GATTGCCGAG
TTCGAACCGC CCCGCCTGCC AGCAGACCTG GTCGGGCAAG GCGACTATTA CCCGTTGGTG
CGCAGCTTTG TCGCCAGTCT GCAAGTGGCC AGCAGTATTG AAGACCTGCT GCAGCAAACG
GTGTTGCAGT TCAAGCGCAT CACCGGCTTT GGGCGGGTCA AGGCCTACCG TTTCGATGCC
GAAGGCAACG GCCAGGTGCT GGCCGAAGTG GCCGACCCAG GCTACCCCAG CTACGCGGGC
CTGTGCTTCC CGGCTGCAGA CATCCCGCGC CAAGCGCGCG AGCTGTACCG GGTCAACCGT
ATCCGCGTGA TCGAGGATGC CAACTATCAG CCCTCGCCAC TGCTGCCCGC AACCAACCCG
CGCACTGGCA AGGCACTGGA CATGAGTTTC GCTGTGCTGC GCAGCGTGTC ACCCGTGCAC
CTGCAGTACA TGCGCAACAT GGGCACGCTG GCCTCGATGT CGCTGTCGAT CGTGGTCGAC
GGCGAGCTGT GGGGGCTGAT TTCCTGCCAC CATCAGCAGC CACGCCCGGT GGACCTGCGC
ACCCGCACGG CCTGCGAGCT GTTGGCCAGC GTACTGTCGT TGCAGATAGA GTCCCGCGAG
TCCCATGCCA GCACGCGCAA GCTGCTGGCG CTGCGCCAAC ACATCGTACG CATGATCTCG
TCCATGGCCG ACCACGACAG CGTCAGTGAC GGCTTGCGCG ACCTGCCTCA CGTGCTGCTG
GCCTTCGCCG ACGCCCAGGG CGCAGCAGTG ATCTCGGCCG AGCGCTGTGA CCTGATCGGC
CAGACCCCGC CTGAGGCCCA GGTGACGGCG CTGGTGCACT GGCTAGGCCA ACGTGACGAA
GACAGCGTGT TTCATAGCGA CAACCTGCGC CGCGACATCA CTGAGCTACC CGAGCTGGCA
AACCATGCTG GCGGGGTGCT GGCAGTGGCC ATCTCGCAGA TCCACTCGCA CTACCTGCTG
TGGTTCCGCC CCGAGCAGAT ACGCACGGTC AACTGGGCCG GCCAGCCGAC CAAGCAGGTC
GGGCCACAGG GCAACCTCGA CCCGCGGCAC AGTTTTGAAC GCTGGCAGGA AGAACTGCGC
GGCTATTGTC AGGCGTGGGA CCCACTGGTG ATCGAGGGCG TGATGGAGCT GCGCACCGCG
GTACTGGGCA TTGTCCTGCG CAAGGCCGAA GAGCTGGCAC AACTGGCTGG CGAATTGCGC
CGCTCCAACA AGGAGCTCGA AGCGTTTTCC TACAGTGTTT CCCACGACCT GCGCGCCCCG
CTGCGGCACA TCGCCGGCTA TACCGAACTG CTTGGCGAAA TCGAAGGCCA GGGCCTGAGC
GAACGCGGCA AGCGCTTCCT GCAGCATATC GGTGAAGCGG CGCACTTTGC CGGGAGCCTG
GTCGACAACC TGCTCAACTT CTCGCAGATG GGCCGCTCGG CCTTGCGCCT GTCCGACGTC
GACCTCAACG CCCTGGTCGA GGCCATTCGC AGCGAGCTGG CCCCCGATTA CGAAGGCCGC
GCAATCGTTT GGGACATCGC CCCGCTGCCC AAGGTGATCG GCGACCCGGC ATTCATCAAC
ATGGCCTTGC ACAACCTGAT AGCCAATGCC ATCAAGTACA CTCGCAGCCG TACGCCTGCT
CGCATCGAAA TCAGTGCCGT ACAGCACCCT GACGAAACCG AGGTCTGCAT CCGCGACAAT
GGCGTGGGCT TCGACATGGC CTACGCCAAC AAGCTGTTCG GCGTCTTCCA GCGCTTGCAC
CGCATGGAAG ATTTCGAAGG CACCGGCATT GGCCTGGCGA GCGTACGCCG CATCATTGAG
CGCCATGACG GTCGAGTCTG GGCCACTGGC CAGATCGACC AGGGCGCCAG CTTTCACTTC
ACCCTACCCC GAAACACTGC TACCTGA
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| Protein sequence | MTADNSLADA MERCAQEPIQ VPGSIQPHGF LLVLDATDLC VLQASENVEH WLGLPARELI
GCHFADLVHE GFDLHAHLTR LPEDEVFPFH IGDVRLRQGA PISAQLHMLV HCHDQVLIAE
FEPPRLPADL VGQGDYYPLV RSFVASLQVA SSIEDLLQQT VLQFKRITGF GRVKAYRFDA
EGNGQVLAEV ADPGYPSYAG LCFPAADIPR QARELYRVNR IRVIEDANYQ PSPLLPATNP
RTGKALDMSF AVLRSVSPVH LQYMRNMGTL ASMSLSIVVD GELWGLISCH HQQPRPVDLR
TRTACELLAS VLSLQIESRE SHASTRKLLA LRQHIVRMIS SMADHDSVSD GLRDLPHVLL
AFADAQGAAV ISAERCDLIG QTPPEAQVTA LVHWLGQRDE DSVFHSDNLR RDITELPELA
NHAGGVLAVA ISQIHSHYLL WFRPEQIRTV NWAGQPTKQV GPQGNLDPRH SFERWQEELR
GYCQAWDPLV IEGVMELRTA VLGIVLRKAE ELAQLAGELR RSNKELEAFS YSVSHDLRAP
LRHIAGYTEL LGEIEGQGLS ERGKRFLQHI GEAAHFAGSL VDNLLNFSQM GRSALRLSDV
DLNALVEAIR SELAPDYEGR AIVWDIAPLP KVIGDPAFIN MALHNLIANA IKYTRSRTPA
RIEISAVQHP DETEVCIRDN GVGFDMAYAN KLFGVFQRLH RMEDFEGTGI GLASVRRIIE
RHDGRVWATG QIDQGASFHF TLPRNTAT
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