Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3338 |
Symbol | |
ID | 5191073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3760471 |
End bp | 3761064 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640587785 |
Product | spore coat U domain-containing protein |
Protein accession | YP_001268648 |
Protein GI | 148548546 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACATC GGCTGCGCCG CCTCACTGCT ACGCTCAGTT CAGGACGTTT CGATAAGGAT AACAAGGTGA CGGAGCGCAT GCTGGCCGCG CTGTTCGGCC TGTTGTTCAG CGGCAGTACC GTGGCGGCGG ATTTTCTCGT GGAAGTGCGG GTACTGGTGC AGCGTGGCTG CATGCTGGTG AACCAGACCC GCGATGCGGG AGCTCAGGCC CTGGGACGTA TCGACCTGGG GGTGACGGCG CGCCTGGATG GCCCTGGCGC GCCCTTGAGC GGTGTGCTGC TAAGCCAGCG CCCGCCGCGC CTGGAGTGCA ACCCGGATAC GCCCTATCAG GTGCGCGTCG ACGGTGGCCA GCATGGTGGC GTCGGCGAAC TGCGCTACCT GGCCAGCGAC GATCGCCAGG CGCGGCCCAT TCCTTACCGC TTGTACCGTG ACGCTGCCTG GCGTGAGCCT CTGGCGGTGG GGGTGGCCCA GTCGGCGCGT GTGCCGGGCA GTGGTTCGGT GGAGTTGCCG CTGTATGCAC GTATCGACAA ACTGGCCTGG GTGCCGAACG CAGGGTTTTA TGCCGACCTG CTGAAAGTCA CCGTCACCTG GTAG
|
Protein sequence | MPHRLRRLTA TLSSGRFDKD NKVTERMLAA LFGLLFSGST VAADFLVEVR VLVQRGCMLV NQTRDAGAQA LGRIDLGVTA RLDGPGAPLS GVLLSQRPPR LECNPDTPYQ VRVDGGQHGG VGELRYLASD DRQARPIPYR LYRDAAWREP LAVGVAQSAR VPGSGSVELP LYARIDKLAW VPNAGFYADL LKVTVTW
|
| |