| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3329 |
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| Symbol | |
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| ID | 5194761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3751245 |
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| End bp | 3752477 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640587776 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001268639 |
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| Protein GI | 148548537 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.875992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.707628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTT CCGCCGCCTC CGTAGCCGCC GCCACGCCTG CCGACCAGCC TCAGGGCTTT
GTCGTGCGCA TCGTCGGTGC TGCTGCATTC GCCCACCTGC TCAACGACCT GATTCAAGCC
GTACTGCCGT CGATCTACCC TATGCTGAAA AGCGATTTCG CGCTGAGCTT TGCCCAGATC
GGCTGGATCG CCTTGGTGTA TCAGGTGACC GCTTCCCTGC TGCAACCTTG GGTCGGCATG
TTCACCGACA AGCACCCACA ACCCTACCTG CTGCCTGCCG GCATGGTGGT GACGCTGGTG
GGCATCGCCC TGCTCGCCTT TGCCGGCAGC TATGAAATGC TGCTGGTGGC CGCCGCCGTG
GTCGGCGTGG GTTCGGCCAC CTTTCACCCA GAGGCCTCGC GGGTCGCCAG GATGGCTTCC
GGCGGGCGCT TCGGGACCGC GCAATCAACC TTCCAGGTCG GCGGTAATAC CGGCTCGGCC
CTCGGCCCAC TGCTCACCGC TGCCATCATC ATTCCGCACG GCCAACCGGC CATTGCCTGG
TTCATGCTGG CCGCTGCGCT GGCCGTTCTG GTGCTGCTGC GGGTGACGGG CTGGAGCGTG
CGCCACGGCC AGGCCCGGCT CAAGCGCTTC GCGGGCCAAC AGGCCCCCGG CCTGTCGCGG
GGTGCCATGT GGCGCGCTGT GGTGGTGATC GCCGTGCTGA TGTTCGCCAA GTTCGTCTAC
ATCGCTTCGT TCACCAACTT CTTCACCTTC TACCTGATCG AGCATTTCGG CCTGAGTGTG
CAGCACAGCC AGCTGTACCT GTTCGTGTTC CTCGCAGCCG TTGCGCTGGG CACCTTTGCC
GGTGGCCCGG TGGGTGATCG CATCGGGCGC AAGGCCGTGA TCTGGGTCTC GTTCCTCGGC
GTGGCGCCCT TCGCCCTGGC CCTGCCCCAT GCCAACCTCG CCTGGACAGC CGTACTGGCG
GTGGCCATCG GCCTGGTGAT GTCCTCGGCA TTCGCTGCCC TGGTGGTGTA TGCCCAGGAG
GCGGTGCCAG GCCGGGTCGG CATGGTTTCG GGGGTGATGT TCGGGCTGAT GTTCGGCATC
AGCGGCGTGG GTGCAGCCGG CCTGGGCACA CTGGCCGACC GGCATGGCAT CGAATGGGTG
TACCAAGCCA TCGCGTTCCT GCCGCTGCTC GGGTTGGCCA CCGCCTTGCT ACCGGCCACC
CGCTCGCGGG CCCGCCCTGG CCGTTGCTGC TAA
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| Protein sequence | MTTSAASVAA ATPADQPQGF VVRIVGAAAF AHLLNDLIQA VLPSIYPMLK SDFALSFAQI
GWIALVYQVT ASLLQPWVGM FTDKHPQPYL LPAGMVVTLV GIALLAFAGS YEMLLVAAAV
VGVGSATFHP EASRVARMAS GGRFGTAQST FQVGGNTGSA LGPLLTAAII IPHGQPAIAW
FMLAAALAVL VLLRVTGWSV RHGQARLKRF AGQQAPGLSR GAMWRAVVVI AVLMFAKFVY
IASFTNFFTF YLIEHFGLSV QHSQLYLFVF LAAVALGTFA GGPVGDRIGR KAVIWVSFLG
VAPFALALPH ANLAWTAVLA VAIGLVMSSA FAALVVYAQE AVPGRVGMVS GVMFGLMFGI
SGVGAAGLGT LADRHGIEWV YQAIAFLPLL GLATALLPAT RSRARPGRCC
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