| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3327 |
|---|
| Symbol | dkgB |
|---|
| ID | 5193376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3749086 |
|---|
| End bp | 3749889 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640587774 |
|---|
| Product | 2,5-diketo-D-gluconate reductase B |
|---|
| Protein accession | YP_001268637 |
|---|
| Protein GI | 148548535 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.475374 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTTC CTTCTTTCGG CCTCGGCACC TTCCGCCTCT CCGGCCAAAC CGTCATCGAC
TCGGTCAAGT CTGCCCTGGC AGTCGGCTAC CGCGTCATCG ATACCGCCCA GATCTACAAG
AACGAAGCCG AAGTGGGCCA GGCCATCGCC GAAAGCGGCG TGCCGCGCAG CGAGCTGTTC
ATCACCACCA AGATCTGGGT CGACAACTAC GCCGCCGACA AGCTGATCCC CAGCCTGCGT
GACAGCTTGC AGAAGCTGCG CACCGACTAC GTCGACCTGC TGCTGATCCA CTGGCCAGCG
CCGGGCAATG GCGTAGAACT GCCCGAGTAC ATGAAGGCCC TGGCCGACGC CAAGCAGCAA
GGCCTGGCTC GCCAGATCGG CATTTCCAAC TTCAACATCG AGCTGACCAG GCAAGCCATT
GCCGTGGTCG GCAAAGGGGA AATCGCCACC AACCAGATCG AGCTCAGCCC CTACCTGCAG
AACAGCAAGT TGACCGCGTT CCTCAAGGAA CAAGGGATCA CCGTGACCTC GTACATGACC
CTGGCCTACG GCAAAGTGCT GAAAGACCCG GTGCTGGCCC AGATCGCCGC CAAGCACAAG
GCTACCGTCG CCCAGGTTGC CCTGGCCTGG GCCTTGCAAT TGGGCTATGC CGTGATCCCG
TCGTCGACCA AGCGTGAAAA CCTGGCCAGC AACCTGCTTG CCCGTGGCCT GACGCTGGAC
AGCGACGACA TGGCACGCAT CGCCAAGCTG GAGCGCAATG GCCGCGAGGT CAGCCCTGAC
GGCCTGGCGC CAACCTGGGA CTGA
|
|---|
| Protein sequence | MSVPSFGLGT FRLSGQTVID SVKSALAVGY RVIDTAQIYK NEAEVGQAIA ESGVPRSELF
ITTKIWVDNY AADKLIPSLR DSLQKLRTDY VDLLLIHWPA PGNGVELPEY MKALADAKQQ
GLARQIGISN FNIELTRQAI AVVGKGEIAT NQIELSPYLQ NSKLTAFLKE QGITVTSYMT
LAYGKVLKDP VLAQIAAKHK ATVAQVALAW ALQLGYAVIP SSTKRENLAS NLLARGLTLD
SDDMARIAKL ERNGREVSPD GLAPTWD
|
|---|
| |