| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3326 |
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| Symbol | |
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| ID | 5191524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3744695 |
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| End bp | 3748882 |
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| Gene Length | 4188 bp |
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| Protein Length | 1395 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640587773 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_001268636 |
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| Protein GI | 148548534 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.902358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCTT CAGTAATACC CGCCGATTCC ATCGATGCGC TGATTGCCCG TCAGTTGCCA
GGCTGGCTCA AGCGCGCATC TGCCCAAGAG CTGACAGGCC TGCGCGCCGC TGCTTTGCGC
CAACAGCGGG CGCAGGACCA CGTCGACGCC TGGTTAGGGG CTATAACCCC CTTGGATGAG
TTCGCCGAGT CGTTGCTCAA ACGTGCGCCC GAGGCTCGTT CGATCAAGCA GGTAGACCTG
CGCCAGGCTC AGCTCAGGCT GGTGACCCTG CAGCCAAAAC CGTCGATATC ACCTGCTTTA
CCAAGCACGT CAACACGCAT CGTCAGCACC CAGACGCTTC TCTCGGCGGC ACTGCATAAC
TTCCACGAAA AGGAAATGCA GCCTGGCTGG TTCGCGGCCG GATCGCAGTT GGTCACTGCC
AGCGGGCACC TGCTGCCGCT AAGTGCGCAA GCTTTTGTCC GACTTTGCAG AGACATCGAT
ATTGGCAGGC GTTATCAAAG CCATTTGCAA TCGAAGCTGG AAGGCGAGGG GGTGGCCGTC
GAGAGCACCC TGGAGGAGGC GTTGAGGGCC AACCTGGCGC TTGCTGCAAT CGCCGCAAGG
ATCAAGGGTG AAATCGATGA GCAGACCTGT CAGTGGATCA ACCAGGTGGT GGGCACAGCG
TCTTTCCAGC CAGCCGACAA CGCCGTGTTG AAGTGTCACA CCCTGCGGCT GTTGGGGAAG
GAGGTCATTG GCGCACTGGT GATCGAAGTG CGTCAGAACG CCCGCCTGCT TGGCGTTATC
GCGTGGTTCC CTGAGGACCC GTATGCCCCG GTGAGTTGGC ACACCAGCTG GGAACTGCTG
TACATGACCC TTGGCATACG TTTGCGTAAT GAAGCGTATC GGCGCTACTT CCAGCGCTTC
GTCGCAGAGC GTGATCGCAT CGCCTTCTGC GCGGCGCTGA ACGCGCTGCT CAGCCACGGT
AATACTGTTC TCCCGCTTGA GCTGGATGGC CGCTGTTTTG CGATCGAGGG CGACGTGTTC
GTCGCGCTGC GCCAGGCCCG GATCGACAAA ATGCTGGATG ACGCACGGGT ATTGGCCGTT
TCGACAGAGG ATGAAGATGT CGCCGACCGT CGCGCACGTT TGCAGGGCTA TCTGGATTTG
GGGTTGAGCG TGGCAGGCCT GGCAGCGCTG TTTGTGCCTG TGTTGGGGCA GGCCCTGCTG
GGGCTTACGG TGATGCAACT GGCAGGTGAG GTGTACGAAG GCTACCAGGA TTGGCAGTTG
GGTGATCGTG ACGCCGCATT GGGCCACTTG TTCAACGTGG CCGACACGGT TGTGATGACG
GCGGTGACGA CGGCCGGAGC GACGGCACTT GGCAAGCTGG CCCAGCGAGT GGCGCAGGTG
GATGCCTTGG TGCCGGTAAG CCTGGGCGAT GGCCAGTTGC GGCTGTGTGA TCCGTCCTTG
TCGGGCTATC AGCGTGAGGG CGTCGATCTG ATGGTAGGGC AGGCCGTGAA TGAAACTGGC
CGTTCGCTGA GGCGCCTGCA CGATGCTGTG TATGAAGTGA GCGAAGGGGA CGATGGCGCA
TGGCGTATTC ATCACCCATC GAGGCCACAG GCCTACGTAC CGGTACTTGA GCACAATGGT
GCCGGGGGAT GGGTGCATGA GTTCGAACAA CCGCAGCGCT GGCATGACGC CGCCTACATG
GTGCGCCGCC TTGCCAGTCG CACGGCGCAG GTGCCGGATG AGGTGATATC TGTGGCGTTG
CAGACCACCG GTCTGGATGC TGATTGCCTG CGCCGTTTGT TATTGGAAAA TGCGCCCCCG
CCGGCACGCT TGCTCGACGC CATCGAGCGC CAGCAATTGC ACCGTGATTT CCCGGCGTTG
CGAGGTGAGG CTTTCGAGGA GGTCTTCAAC GAGCGACAGA TCAGCCCGCA AGCAGCAGAC
CGGGTCGTGA TGCGGGACTT CCCAGGCCTT TCCCCCCGCT GCGCACGGGA AATCGTCGAG
GGGGCCAGCA GTGTCGAGAT GGAGAGCCTG ACTGGCGCAG GCCGGGTGCC CTTGGCCTTG
GCGGAACGTG CACGCTGGGC AATACGCGAC AGTCGGCTAG ACCGTGCCTG CGCAGGGTTG
CGCCAGGCCG CGGCAGAAAA TGACGATACC GGTAAGCTCG CGCTGGGCCT GCTCGATGCC
ATCGCCCCCT GGTCGGCTGG GGTCAACGTT GAGCTGCCTG CCGCGGGCAG GGGTGGGTTG
CTGCAGACGT TGAGACGGCA ACTGGACAGC CGGCAGCGAC AATTGCTTGG TATTAGCCAG
ATGAGGGATG ACGCACTGGG TGAGCGGCTT GGGCGTGAGG CACTCGCTGA CCGTGAAGCG
GCGGCCCGAA TGATTGGGCT GGCCCGTGTG GGGCAGGGGA TTCGCCCTCC TGTGCGGTTG
TTCGATGGGC GTTTGGGCTA CCCGCTCAGT GGCCACCTGA CAGGCACCCG CCAGGCACTG
CGGCGCACGT TGAACCACGT GTTCCCGGTG ATGAGCAGTG AGCAGCTGGA GGTCTACCTG
CAAGACCTGG CACAGCGGGG GGTGGACCCG TGGAACCATG TCAGCCAACT GTTACAGGCC
AAGGTCAGCC TCAAGCAGGC ATTGCAAGCC TGGCGAAATG ACGCAGGGCT GAACATTGTT
CGCCGCCTGC GTCGTATCAA GGTTGCCAGG CGCATTACGG CAAGCTGGCA GCGCTTTACC
CCTGGGGAGG TGGCGGGTGA CTACCACCTG ACCCTCGTGG GTGAGCGGGT GGGTGACCTG
CCGGCTTTGC CTGAAAATGT GAGTTTTGAC CACATCACGC ACCTGACCCT GCGCGATATG
CAGCTGACGA GCCTTGATGC GGGCTTTTTT GGTCGCTTCA GCAAGGTGCG CAACCTGGAC
TTGCGGAACA ACCGGCTGAC ACGCCTTCCT GCAGGTATCG AGCAACTGAC CGAATTGAAA
AACCTGCGCC TTGGCGGCAA CCAGATCGTG CTTTCCAGCG AGGATAACCT GCGTTTGAGC
CAGCTTGTGG AACTGCGCCG CCTGGAGCTC AACGGCAACC CGGTCGGTTT GCTGCCACCC
TTGGCGTCTT TCCCCCTGCT GCGCCGGCTG TCCTTGCGCA ACACCGGGCT GGGCGAACTG
CCCGCTGATC TGGCCAGGCA CGGTAATCTG GAGTTGCTGG ACATGCGTGA CAACCAGATC
CAGACGCTGC CTGAAGCGTT GTCTTTAGTG CCGCTTCGCC TGTGGCGGGG CCTGGAGCTG
CACGACAATC CACTCTCGGA CGAAACCCTG CAGCGCTTGC AGTTGGCCAG GGCGTCGGCC
GGGGCTGCTG AGCGTCGACG TGCAGCTCAT GCCACTTCGA TCCCGAACGC TGCAGCCCCT
TGGTTTTCAG GGTTCACGCC AGCCCAGCGC GAGGTGCGAT TGGCGAGCTG GAACCGCTTG
AGCCAGGAAG CCGGGGCGCA GGATCTGTTT CGCTTTTTCT CTGATTTACG GGCCCTGCGT
GAATACGACG CACAACCGCG CGACCTTCAG GCGCGGGTGT GGCATATCCT CGAAGCCTGC
GAACAGCACG CTGAAGTACG CGCGAGCCTG TTCGAGCAAG TTGCCCGGCC GCGCAGTTGC
AGCGACGAGT TGCTGCTGAC GCTCAGCGAG CTGGAGGTTG GCGCGCTGGT CGCCAAGGCC
GGAACAGCCG GTACCGGGTT GCAGAAAGAG CGGGCGCTGG TCAGGCTGGG GCGTTCGTTG
TTCCGCCTGG ACAAAGTCAA CGCAATTGCC GCGCGGCATA TTGCGGATTA CTTTTCGAAC
GATCCCGTAG AGGTTTACCT GACCTATCGC GTCAGGCTGG CGGATAGCCT CGACCTTCCC
GTGCAGCCCA GCCATCTTTC GTATGAGAGT TTCAGCGGGG TTGGCCGCGA AGACCTGGAC
GCCGCGCGCA GCGAGGTGCT GCGGCAGGAA ACGCCACAAG CGTTGGCGCA GGCGCTGGCA
GATCGATCCT TCTGGCAGGA CTACCTGCAC GAGCAGCAGG CGGCGCGCTT CAGCCGCCTG
GACGAGCCTT TTCAGCAGCG CCTGGATGTG TTGCTGGAAC AATCGAAAAC GCTGAGCGAT
GGCGACTATT TTGCCCAGGT CGAGCATATC TGCGCAGCGC GTGAGGTCGC GAAACGGCAG
CTTTTGCTTG AATTGAGCCG AGAGGCAATT CAACGCCACG GCCTATGA
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| Protein sequence | MTPSVIPADS IDALIARQLP GWLKRASAQE LTGLRAAALR QQRAQDHVDA WLGAITPLDE
FAESLLKRAP EARSIKQVDL RQAQLRLVTL QPKPSISPAL PSTSTRIVST QTLLSAALHN
FHEKEMQPGW FAAGSQLVTA SGHLLPLSAQ AFVRLCRDID IGRRYQSHLQ SKLEGEGVAV
ESTLEEALRA NLALAAIAAR IKGEIDEQTC QWINQVVGTA SFQPADNAVL KCHTLRLLGK
EVIGALVIEV RQNARLLGVI AWFPEDPYAP VSWHTSWELL YMTLGIRLRN EAYRRYFQRF
VAERDRIAFC AALNALLSHG NTVLPLELDG RCFAIEGDVF VALRQARIDK MLDDARVLAV
STEDEDVADR RARLQGYLDL GLSVAGLAAL FVPVLGQALL GLTVMQLAGE VYEGYQDWQL
GDRDAALGHL FNVADTVVMT AVTTAGATAL GKLAQRVAQV DALVPVSLGD GQLRLCDPSL
SGYQREGVDL MVGQAVNETG RSLRRLHDAV YEVSEGDDGA WRIHHPSRPQ AYVPVLEHNG
AGGWVHEFEQ PQRWHDAAYM VRRLASRTAQ VPDEVISVAL QTTGLDADCL RRLLLENAPP
PARLLDAIER QQLHRDFPAL RGEAFEEVFN ERQISPQAAD RVVMRDFPGL SPRCAREIVE
GASSVEMESL TGAGRVPLAL AERARWAIRD SRLDRACAGL RQAAAENDDT GKLALGLLDA
IAPWSAGVNV ELPAAGRGGL LQTLRRQLDS RQRQLLGISQ MRDDALGERL GREALADREA
AARMIGLARV GQGIRPPVRL FDGRLGYPLS GHLTGTRQAL RRTLNHVFPV MSSEQLEVYL
QDLAQRGVDP WNHVSQLLQA KVSLKQALQA WRNDAGLNIV RRLRRIKVAR RITASWQRFT
PGEVAGDYHL TLVGERVGDL PALPENVSFD HITHLTLRDM QLTSLDAGFF GRFSKVRNLD
LRNNRLTRLP AGIEQLTELK NLRLGGNQIV LSSEDNLRLS QLVELRRLEL NGNPVGLLPP
LASFPLLRRL SLRNTGLGEL PADLARHGNL ELLDMRDNQI QTLPEALSLV PLRLWRGLEL
HDNPLSDETL QRLQLARASA GAAERRRAAH ATSIPNAAAP WFSGFTPAQR EVRLASWNRL
SQEAGAQDLF RFFSDLRALR EYDAQPRDLQ ARVWHILEAC EQHAEVRASL FEQVARPRSC
SDELLLTLSE LEVGALVAKA GTAGTGLQKE RALVRLGRSL FRLDKVNAIA ARHIADYFSN
DPVEVYLTYR VRLADSLDLP VQPSHLSYES FSGVGREDLD AARSEVLRQE TPQALAQALA
DRSFWQDYLH EQQAARFSRL DEPFQQRLDV LLEQSKTLSD GDYFAQVEHI CAAREVAKRQ
LLLELSREAI QRHGL
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