Gene Pput_3317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3317 
Symbol 
ID5195465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3732419 
End bp3733003 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content62% 
IMG OID640587764 
ProductHesB/YadR/YfhF-family protein 
Protein accessionYP_001268627 
Protein GI148548525 
COG category[O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID[TIGR03341] IscR-regulated protein YhgI 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0770851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTA TAACCATTAC CGACGCCGCC CATGACTACC TGGCCGATCT GCTCTCCAAG 
CAGAATACGC CCGGCATCGG CATTCGCATT TTCATCACCC AGCCGGGCAC CCAGTACGCC
GAGACGTGCA TCGCCTACTG CAAGCCGGGC GAAGAGAAGC CTGACGACAC CGCCGTGGGT
CTGAAAAGCT TCACTGCTTA CCTGGACGCC GTCAGCGTAC CGTTCCTGGA AGACGCACTG
GTCGACTACG CCACCGACCG CATGGGCGGC CAGCTGACCA TCAAGGCGCC AAACGCCAAG
GTGCCGATGG TCAACGAAGA CAGCCCGATC AACGAGCGTA TCAACTACTA CCTGCAGACC
GAGATCAACC CCGGCCTGGC CAGCCATGGC GGCCAGGTGA GCCTGGTGGA CGTGGTCGAT
GACGGCATTG CCGTGCTGCA GTTCGGTGGT GGCTGCCAGG GTTGCGGCCA GGCCGATGTC
ACCCTGAAGG AAGGCATCGA GCGCACCCTG CTCGAGCGTA TTCCGGAGCT GAAGGGCGTG
CGCGACGTGA CTGACCACAG CCAGAAAGAA AACGCCTACT ACTGA
 
Protein sequence
MSAITITDAA HDYLADLLSK QNTPGIGIRI FITQPGTQYA ETCIAYCKPG EEKPDDTAVG 
LKSFTAYLDA VSVPFLEDAL VDYATDRMGG QLTIKAPNAK VPMVNEDSPI NERINYYLQT
EINPGLASHG GQVSLVDVVD DGIAVLQFGG GCQGCGQADV TLKEGIERTL LERIPELKGV
RDVTDHSQKE NAYY