| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3316 |
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| Symbol | |
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| ID | 5194796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3731614 |
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| End bp | 3732285 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587763 |
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| Product | electron transport protein SCO1/SenC |
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| Protein accession | YP_001268626 |
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| Protein GI | 148548524 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.189227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCGGT TTTTCGACCG GCCCGTCCCG AGGGCCGGCA CCTTCCCTGT AAAGGATGGT
TTCATGAATG ATCTTTTGAC CCGGCGTGCG GTTGTCGCCG GCATGGGCGT TCTCGGGCTT
GGCCTGCTGG CAGGCTGCAG CCCGGCCCGG GGGCTCGAGT TCAAGTACGG CAAGAACATG
AGCAACGAAA TCCTCGGGCG CAAGTTCAGC CTCAAAGACC CGCAAGGTAA CGTGCGCACC
CTGTCGAGCT TCTACGGCAG CATGCCGATG GTCTTCTTCG GCTTTACCCA GTGCCCGGCC
GTCTGCCCGA CCACGCTGGC GCGGGCGGCG CAGATTCGCA AGCTGCTGAG GGGCCGCGAC
CGCGACCTGT TCCAGGTGGT ATTCATCACC CTGGACCCGG AGCGCGACAC GCCCGAGGTG
CTCGATGCCT ACGTCAAGGC CTTCGACCCG ACGTTCACCG CGCTGACCGG CACCCCCGAG
GAAATTGCCG CGGTGGCCAA GGAATTCAAG GTGTTCTACG AGAAGGTTCC GGCCGGAGAC
ACCTACACCA TTTCTCATTC GTCCACCAGC TACGTCTACG ATACACGTGG CACCCTGCGC
CTGAGCCTTG GCCATTCCCT GAACGCCAAG GAATGCGCCG AAGATCTGGT CACCCTGATG
GAGATCTGCT GA
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| Protein sequence | MPRFFDRPVP RAGTFPVKDG FMNDLLTRRA VVAGMGVLGL GLLAGCSPAR GLEFKYGKNM
SNEILGRKFS LKDPQGNVRT LSSFYGSMPM VFFGFTQCPA VCPTTLARAA QIRKLLRGRD
RDLFQVVFIT LDPERDTPEV LDAYVKAFDP TFTALTGTPE EIAAVAKEFK VFYEKVPAGD
TYTISHSSTS YVYDTRGTLR LSLGHSLNAK ECAEDLVTLM EIC
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