| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3312 |
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| Symbol | |
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| ID | 5190809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3728288 |
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| End bp | 3729133 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640587759 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001268622 |
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| Protein GI | 148548520 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.403912 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGC CCTTGCGCGA GCAGACACAC CTCTGGCAGG CGCCAGCCCT TGGCGACGTC
GAGATGCTGC ACGCTCGCTA CTACCAGCAG CGCTTCGCCC CGCATGTGCA CGAAGGCTAT
GTATTCACCG TGATCGAGTC GGGCGCCCAG CGCTTCTGGC ACCGCGGCAG CGAGCACTTG
GCACCGGTCG GCAGCATGGT GCTGATCAAC CCCGACGAAC TGCATACCGG CGCTACGGCC
CATGAAGCCG GCTGGCGTTA TCGCGGCTTC TATCCCGAGC ACGAGCGGGT GACCGGTGTG
CTCGACGAAC TGGAACTGGG CCGCCACGGC ATGCCCAGCT TCAAGGACAG CGTGATCCAT
GACCCGGCCC TGGCCCTCGC GTTCAGCCAG CTGCATCAGT TATCCGAAGC CAGCGCCAGC
GCCTTGCAGC AGCAGACGGC CTGGCGCCAG GCGGTGCTGG CCCTGGTGCA GCGGCACGGG
CAGTGCGCCG AGCCTTCGGC CCCTGGCCAC GAACCCCTGG CCGTAGCCCG CGCCCGCGAA
CTGCTGGAAA GCCAACTGGC CGACCCGCCC TCACTGGAAG CGCTGGCGGC AGCAGTCAAC
CTGTCGCCGT TCCACTTCGC CCGGGTGTTC CGCCAGGCCA CTGGACTGCC ACCCCATGCC
TGGCTGAAGC AACGCCGCCT GGCCCGCGCC CGCGAAATGC TGAAGCACGG CCTGGCCGCT
TCGCAAGTGG CGTTCGACCT CGGCTTTGCC GACCAGAGCC ATTTGAGCCG GCAGTTCAAG
CAAGCCTATG GGGTGACCCC GGGGGCGTAT CGGCAAGCCT GCGTCCACTC TGCTCTGCGC
GCGTGA
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| Protein sequence | MSPPLREQTH LWQAPALGDV EMLHARYYQQ RFAPHVHEGY VFTVIESGAQ RFWHRGSEHL
APVGSMVLIN PDELHTGATA HEAGWRYRGF YPEHERVTGV LDELELGRHG MPSFKDSVIH
DPALALAFSQ LHQLSEASAS ALQQQTAWRQ AVLALVQRHG QCAEPSAPGH EPLAVARARE
LLESQLADPP SLEALAAAVN LSPFHFARVF RQATGLPPHA WLKQRRLARA REMLKHGLAA
SQVAFDLGFA DQSHLSRQFK QAYGVTPGAY RQACVHSALR A
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