Gene Pput_3311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3311 
Symbol 
ID5190808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3727977 
End bp3728291 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content61% 
IMG OID640587758 
Productbranched-chain amino acid transport 
Protein accessionYP_001268621 
Protein GI148548519 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.993943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.35173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGGA TCCTGATTTT CGCCATGGGC GCCATCGTGT TTCTCAACCG CTACGCATTC 
CTGGAGCCGC GCCTGCCCTT GCGCCTGAGC TCGAATGCCC GGCAGTTTCT CGGCTTTGCC
GTGCCGGGCA TGCTCACCGC CATCTGCGGC CCGATCATCT TCATGGCTGA CCACCAGCTC
AACCTGAGCG TGCTCAACCC CTACCTGCTG GGCTCCCTTG TGGCCATCGC CCTGGTGCTG
TTGACCCGCA GCGTATTGCT GAGCATGCTG GTGAGCATGT TGATCTTCTT CCTTCTGCGC
AGCTGGCTGG CATGA
 
Protein sequence
MTWILIFAMG AIVFLNRYAF LEPRLPLRLS SNARQFLGFA VPGMLTAICG PIIFMADHQL 
NLSVLNPYLL GSLVAIALVL LTRSVLLSML VSMLIFFLLR SWLA