Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3311 |
Symbol | |
ID | 5190808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3727977 |
End bp | 3728291 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640587758 |
Product | branched-chain amino acid transport |
Protein accession | YP_001268621 |
Protein GI | 148548519 |
COG category | [S] Function unknown |
COG ID | [COG4392] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.993943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.35173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGGA TCCTGATTTT CGCCATGGGC GCCATCGTGT TTCTCAACCG CTACGCATTC CTGGAGCCGC GCCTGCCCTT GCGCCTGAGC TCGAATGCCC GGCAGTTTCT CGGCTTTGCC GTGCCGGGCA TGCTCACCGC CATCTGCGGC CCGATCATCT TCATGGCTGA CCACCAGCTC AACCTGAGCG TGCTCAACCC CTACCTGCTG GGCTCCCTTG TGGCCATCGC CCTGGTGCTG TTGACCCGCA GCGTATTGCT GAGCATGCTG GTGAGCATGT TGATCTTCTT CCTTCTGCGC AGCTGGCTGG CATGA
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Protein sequence | MTWILIFAMG AIVFLNRYAF LEPRLPLRLS SNARQFLGFA VPGMLTAICG PIIFMADHQL NLSVLNPYLL GSLVAIALVL LTRSVLLSML VSMLIFFLLR SWLA
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