| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3302 |
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| Symbol | |
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| ID | 5192914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3718074 |
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| End bp | 3720434 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587749 |
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| Product | DNA polymerase II |
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| Protein accession | YP_001268612 |
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| Protein GI | 148548510 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0835238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTTGC AGCAGGGTTT TGTCCTGACC CGGCACTGGC ACGATACGCC GGAAGGCACC
TGCGTGGAGT TCTGGCTGGC CACCGATGCC GGGCCCCGGC TGTTGCGGCT GGCGGCGCAG
GAGTCGGTGG CTTTCATTCC TCAGGCGCAG GCCGAGCATG CCCGTGTGCT GCTGGCCAAC
GAAGCAGGGA CCAAGCTCAA GCCATTGCGC CTGAAGGACT TCGAGCATCG CCCGATGCTC
GGCCTGTATG CCCGCCAGCA TCGCCAGTTG ATGCAACTGG AGCAGCGTCT GCGCACGGCC
GGTATCGACG TGTTCGAGGC CGATATCCGC CCGCCGGAGC GTTACCTCAT GGAGCGCTTC
ATCACGGCGC CGGTGCAGTT CACTGGTCAG CCGGATGCGC AGGGCGTTTA CCGGGACGCC
CAGCTCAAGC CGCAGCCAGG CTATCGCCCG GCGCTGCGCC TGGTGTCGCT GGACATCGAG
ACCAGCGAGC GTGGCGAGCT GTACAGCATC GCGCTGGAGG GCTGTGGTCA GCGCCAGGTG
TACATGCTCG GCCCGGCCAA CGGCGATGCC ACCGGGCTTG ACTTCGACCT GGAGTATTGC
GCCGATCGCG CCGCCTTGAT TACCCGGCTC AACCAGTGGA TGGCCAAGCA TGACCCGGAC
GCGATCATTG GCTGGAACCT GGTGCAGTTC GACCTGCGCC TGCTGCATGA GCACGCCAAG
TCATTGCAGG TGCCACTGGC CCTGGGGCGC AACGGTGCGG TCATGACCCT GCGCAGCCAT
GCCGGTGGCG GCCATGTCTT CGCCGATGCG CCGGGGCGGC TGCTGATCGA TGGCATCGAG
GCGTTGCGTT CGGCCACCTG GAGCTTTGCC TCGTTCAGCC TGGAGAACGT TGCCCAGACC
CTGCTGGGTG AAGGCAAGGC CATCGACACG CCGTACCAAC GCATGGACGA AATCAATCGC
CGCTTCGCCG AAGACAAACC GGCCCTGGCG CGCTACAACC TGAAGGACTG CGAACTGGTC
ACGCGCATTT TCGCCCATAC CCGGCTGCTC GACTTCCTGC TCGAACGTGC CTCGGTGACG
GGATTGGCCG TGGACCGCAG CGGTGGGTCG GTAGCTGCGT TCTGTCACTT GTACATTCCA
CAGATGCACC GCCTTGGCTT TGTCGCGCCC AGCCTTGGCA GCCGCCCTGA CGAAGCCAGC
CCCGGCGGGT TTGTCATGGA TTCGCGGCCA GGGCTTTACG ACTCGGTGCT GGTGCTGGAC
TACAAGAGCC TGTACCCATC GATCATCCGT ACCTTTCTCA TCGACCCGGT CGGGCTGATC
GAAGGCTTGC GCCAGCCTGA CGACGCACAT TCGGTCGAGG GTTTTCGCGG TGGGCGTTTT
TCACGCACAC AGCACTGCCT GCCAGCCATC GTCGAACGGG TGTGGCAGGG CAGGGAAGCG
GCCAAGCGCG AGGGCAATGC GCCGCTGTCA CAGGCCTTGA AAATCATTAT GAATGCCTTT
TATGGCGTGC TTGGTTCCAG CGGTTGCCGT TTCTTCGACC CGCGCCTGGC GTCGTCGATC
ACCATGCGCG GCCACCAGAT CATGCGCCAG ACCAGGTCCC TGATCGAGGC GTGTGGCTAC
GATGTAATCT ACGGTGACAC CGACTCCACC TTTGTCTGGC TCAAGGGTGC CCACGCCGAG
GAAGACGCGG CGCGCATCGG CCGCGAGCTG GTGGCAAAGG TCAACCAATG GTGGCAAGCC
CATCTGCACG AGACCATGAA CCTGCAGAGC GCCCTCGAAC TGCAGTTCGA GGTGCATTAC
CGACGCTTCC TGATGCCCAC CATCCGCGGT ACCGATGAAG GCAGCAAAAA GCGCTATGCC
GGCCTGGTGC AGCGGGCCGA CGGTGCTGAA GAAATGGTTT ACAAGGGCCT GGAATCGGTG
CGCACCGACT GGTCACCGCT GGCCCGGCAG TTCCAGCAGG AACTCTACGG CCGAGTGTTC
CGCAGCGAGC CCTACCGTGA TTATGTCCGC GAGTACGTGC GGCGAACGTT GGCGGGCGAG
CAGGACGAAC TGCTGGTTTA TCGCAAGCGC CTGCGTCGCC CGCTGGCCGA TTACCAGCGC
AACGTGCCGC CGCATGTGCG TGCCGCACGC CTTGCCGACG ACTACAACAA GCGTCTGCAG
CGCCCTCTGC AGTATCAGCG TGGGGGCTGG ATCAGCTACG TGATCACCAC CGCCGGGCCT
GAGCCGCTGG AAAACCTGCA GGCACCGATC GACTACGATC ACTACATCAG CCGTCAGCTA
CTGCCGGTGG CCGACGCCAT CCTGCCCTTT GTCGGCGATG ATTTCGCGCG CCTTACCGAC
CATCAGTTAC TGCTGTTCTG A
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| Protein sequence | MELQQGFVLT RHWHDTPEGT CVEFWLATDA GPRLLRLAAQ ESVAFIPQAQ AEHARVLLAN
EAGTKLKPLR LKDFEHRPML GLYARQHRQL MQLEQRLRTA GIDVFEADIR PPERYLMERF
ITAPVQFTGQ PDAQGVYRDA QLKPQPGYRP ALRLVSLDIE TSERGELYSI ALEGCGQRQV
YMLGPANGDA TGLDFDLEYC ADRAALITRL NQWMAKHDPD AIIGWNLVQF DLRLLHEHAK
SLQVPLALGR NGAVMTLRSH AGGGHVFADA PGRLLIDGIE ALRSATWSFA SFSLENVAQT
LLGEGKAIDT PYQRMDEINR RFAEDKPALA RYNLKDCELV TRIFAHTRLL DFLLERASVT
GLAVDRSGGS VAAFCHLYIP QMHRLGFVAP SLGSRPDEAS PGGFVMDSRP GLYDSVLVLD
YKSLYPSIIR TFLIDPVGLI EGLRQPDDAH SVEGFRGGRF SRTQHCLPAI VERVWQGREA
AKREGNAPLS QALKIIMNAF YGVLGSSGCR FFDPRLASSI TMRGHQIMRQ TRSLIEACGY
DVIYGDTDST FVWLKGAHAE EDAARIGREL VAKVNQWWQA HLHETMNLQS ALELQFEVHY
RRFLMPTIRG TDEGSKKRYA GLVQRADGAE EMVYKGLESV RTDWSPLARQ FQQELYGRVF
RSEPYRDYVR EYVRRTLAGE QDELLVYRKR LRRPLADYQR NVPPHVRAAR LADDYNKRLQ
RPLQYQRGGW ISYVITTAGP EPLENLQAPI DYDHYISRQL LPVADAILPF VGDDFARLTD
HQLLLF
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