Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3298 |
Symbol | |
ID | 5190595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3707540 |
End bp | 3708196 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640587745 |
Product | hypothetical protein |
Protein accession | YP_001268608 |
Protein GI | 148548506 |
COG category | [S] Function unknown |
COG ID | [COG3767] Uncharacterized low-complexity protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.60947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCCAA GGCAACTTGG GGCCCGTTGC CGGGTGGTGT GTATCGCACT GTATCTGCCT GTGCTGCAGA CCTACTGCCA TACAAAAGTG CGCCTGGCAC GATACATCCA CGACAAACCG CAACGGCCTA ATGGCTCCAC TTTCCAACCC CAGTGGAGCT GCATCATGAC TCAAGCAAAA AACACCCTCG GCCTGCTCGG CGCCGCCCTG ATCGGCAGCA TGGCATTGAG CAACAGTGCG TTCGCCGTCG AGCCGCTGGC TCAAGGTTAC CAACTGGCCT CGGCCAAAGT GGCCGGCGAG GGCAAGTGTG GTGAAGGCAA GTGCGGGGGG AGCGGCAAGG CTTCCCAGAG CGAAGGCAAG TGCGGTGAGG GTAAGTGCGG CGCCGGCGCC AAGGCTGGGG CCGAGGGCAA GTGTGGTGAA GGCAAGTGCG GTGACGCCTC GTTCGCCAAG ACCGACAGCA ATCACGATGG CAAGGTCTCG CGCGATGAGT TTCTGGCGGT GGCCAAGGAC CGTGCCCGTG ATTTCGACAC GATCGACCGC AACCATGACG GTTTCATCTC CGAGCAGGAA GCGGCCGATC ACCTCAAGGC GATTTATCAG GCCAATGGCA AAGCCATGCC TGATGGCTTG TTCAGCCACC TGACCGGCAA GCCCTGA
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Protein sequence | MAPRQLGARC RVVCIALYLP VLQTYCHTKV RLARYIHDKP QRPNGSTFQP QWSCIMTQAK NTLGLLGAAL IGSMALSNSA FAVEPLAQGY QLASAKVAGE GKCGEGKCGG SGKASQSEGK CGEGKCGAGA KAGAEGKCGE GKCGDASFAK TDSNHDGKVS RDEFLAVAKD RARDFDTIDR NHDGFISEQE AADHLKAIYQ ANGKAMPDGL FSHLTGKP
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