Gene Pput_3298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3298 
Symbol 
ID5190595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3707540 
End bp3708196 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content61% 
IMG OID640587745 
Producthypothetical protein 
Protein accessionYP_001268608 
Protein GI148548506 
COG category[S] Function unknown 
COG ID[COG3767] Uncharacterized low-complexity protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.60947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCAA GGCAACTTGG GGCCCGTTGC CGGGTGGTGT GTATCGCACT GTATCTGCCT 
GTGCTGCAGA CCTACTGCCA TACAAAAGTG CGCCTGGCAC GATACATCCA CGACAAACCG
CAACGGCCTA ATGGCTCCAC TTTCCAACCC CAGTGGAGCT GCATCATGAC TCAAGCAAAA
AACACCCTCG GCCTGCTCGG CGCCGCCCTG ATCGGCAGCA TGGCATTGAG CAACAGTGCG
TTCGCCGTCG AGCCGCTGGC TCAAGGTTAC CAACTGGCCT CGGCCAAAGT GGCCGGCGAG
GGCAAGTGTG GTGAAGGCAA GTGCGGGGGG AGCGGCAAGG CTTCCCAGAG CGAAGGCAAG
TGCGGTGAGG GTAAGTGCGG CGCCGGCGCC AAGGCTGGGG CCGAGGGCAA GTGTGGTGAA
GGCAAGTGCG GTGACGCCTC GTTCGCCAAG ACCGACAGCA ATCACGATGG CAAGGTCTCG
CGCGATGAGT TTCTGGCGGT GGCCAAGGAC CGTGCCCGTG ATTTCGACAC GATCGACCGC
AACCATGACG GTTTCATCTC CGAGCAGGAA GCGGCCGATC ACCTCAAGGC GATTTATCAG
GCCAATGGCA AAGCCATGCC TGATGGCTTG TTCAGCCACC TGACCGGCAA GCCCTGA
 
Protein sequence
MAPRQLGARC RVVCIALYLP VLQTYCHTKV RLARYIHDKP QRPNGSTFQP QWSCIMTQAK 
NTLGLLGAAL IGSMALSNSA FAVEPLAQGY QLASAKVAGE GKCGEGKCGG SGKASQSEGK
CGEGKCGAGA KAGAEGKCGE GKCGDASFAK TDSNHDGKVS RDEFLAVAKD RARDFDTIDR
NHDGFISEQE AADHLKAIYQ ANGKAMPDGL FSHLTGKP