Gene Pput_3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3295 
Symbol 
ID5191805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3705422 
End bp3705910 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content62% 
IMG OID640587742 
ProductDoxX family protein 
Protein accessionYP_001268605 
Protein GI148548503 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCT TGACCCGTAC CCTGACCACC GTTGATCGCC TCGGCAGCTG GAGTGCCGAC 
GTGCCATTAC GGGTATTTCT GGCCTGGGAG TTTTTCGAAT CCGGCCTGGA GAAATTCAAC
GGCAGCAACT GGTTCGCCGA CCTGCAGTCC AGCTTCCCGT TCCCCTTCAA CCTGCTGCCC
GCGGAGCTGA ACTGGCAGCT GTCGATGTGG GCCGAGTTGG TGCTGCCGTT GCTGCTGTTG
CTGGGCCTGG GTACCCGGCT GGCATCGTTG GGTTTGATGG TGGTGACCGT TGTAGCCATA
GCGGCAGTGC ACTGGCCGGC GCACTGGTCG GGCCTGGCGG AGCTGGCCCA AGGCTATGCC
ATTACCGACC AGGGCTTCGG CAATTACAAG TTGCCGCTGA TCTACCTGGT CGCGTTGCTG
CCCCTGCTGC TCAAGGGCGC CGGGCGCCTT AGCCTCGATC ATTGGCTTGG CATGCGGTTC
GGCAGATGA
 
Protein sequence
MTTLTRTLTT VDRLGSWSAD VPLRVFLAWE FFESGLEKFN GSNWFADLQS SFPFPFNLLP 
AELNWQLSMW AELVLPLLLL LGLGTRLASL GLMVVTVVAI AAVHWPAHWS GLAELAQGYA
ITDQGFGNYK LPLIYLVALL PLLLKGAGRL SLDHWLGMRF GR