Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3292 |
Symbol | |
ID | 5190358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3702602 |
End bp | 3703342 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640587739 |
Product | two component transcriptional regulator |
Protein accession | YP_001268602 |
Protein GI | 148548500 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACACG TCGATCACAT CCTGATCGTC GACGACGACC GCGAGATCCG CGAACTGGTC GGCAATTACC TGAAGAAGAA CGGCCTGCGC ACCAGCATCG TTGCCGACGG CCGGCAGATG CGCGCCTTTC TCGAAGCCAA CAGCGTCGAC CTGATCGTGC TCGACATCAT GATGCCTGGC GACGACGGCC TGCTGTTGTG CCGCGAGCTG CGCGCCGGCA AGCACCGCAA TACGCCGGTG CTGATGCTGA CCGCCCGCAA TGACGAAACC GACCGCATCA TCGGCCTGGA AATGGGCGCC GACGATTACC TGACCAAACC GTTCTCGGCC CGCGAACTGC TCGCCCGCAT CAACGCCGTG CTGCGCCGCA CACGCATGCT GCCGCCCAAC CTGACCATCA GTGAAAGCAG CCGCCTGCTG GGTTTCGGTC AGTGGCGCCT GGACACCACC GCGCGCCACC TGCTCGACAG CGAAGGCACC CTGGTGGCCC TGAGCGGCGC CGAGTACCGC CTGCTGCGGG TGTTCCTCGA CCACCCGCAG CGGGTGCTCA GCCGCGAACA GCTGCTTAAC CTGACCCAGG GCCGCGAAGC CGACATCTTC GACCGCTCCA TCGACTTGCT GGTCAGCCGC CTGCGCCAGC GCCTGGGTGA CGATGCCCGC GAGCCCAGCT GCATCAAGAC CGTGCGCAGC GAGGGCTACG TGTTTTCGCT GCCGGTGCAA TTGCTCGAGT CTCCCTCATG A
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Protein sequence | MEHVDHILIV DDDREIRELV GNYLKKNGLR TSIVADGRQM RAFLEANSVD LIVLDIMMPG DDGLLLCREL RAGKHRNTPV LMLTARNDET DRIIGLEMGA DDYLTKPFSA RELLARINAV LRRTRMLPPN LTISESSRLL GFGQWRLDTT ARHLLDSEGT LVALSGAEYR LLRVFLDHPQ RVLSREQLLN LTQGREADIF DRSIDLLVSR LRQRLGDDAR EPSCIKTVRS EGYVFSLPVQ LLESPS
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