| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3284 |
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| Symbol | |
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| ID | 5192725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3692911 |
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| End bp | 3694248 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587731 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001268594 |
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| Protein GI | 148548492 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.703744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.714733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAT ATCATGAGGT ATCCCCCGCC ACCCTGCGCA GGGTGATTGC CGCTTCGGCC
ATCGGCAATT TCGTCGAATG GTTCGACTTC GCCGTGTACG GCTTTCTCGC CACGCTGATC
GCCAGCCAGT TTTTCGCCAG CGAAGACGCC AGCGTAGCCT TGCTCAAAAC CTTCGCGGTG
TTCGCCGTGG CCTTCGCCCT GCGTCCCTTG GGCGGCATCG TCTTCGGCGC CCTGGGCGAC
CGCCTGGGAC GCAAGCGCAT CCTGTCGCTG ACCATCTTGC TGATGGCCGG CTCCACCACG
TTGATCGGCC TGCTGCCGAC CTACGCCAGT ATCGGCCTGG CAGCCCCGGC GCTGCTGACC
CTGGCCCGCT GCCTGCAGGG TTTTTCTGCC GGTGGCGAAT ATGCCGGGGC CTGCGCCTAC
CTGATGGAGC ACGCGCCTGA CAACAAGCGC GCCTTTTATG GCAGCTTCGT GCCTGTGTCG
ACCTTTTCCG CCTTTGCCTG TGCGGCGGTG ATCGCGTATG GCCTGGAAGC CAGCCTGTCG
ACCGAGGCGA TGAATGCCTG GGGTTGGCGC ATTCCGTTCC TGATTGCAGC ACCGCTGGGC
CTGGTCGGCC TGTACCTGCG CTGGCGCATG GAAGAAACCC CGGCGTTCCG CGAAGCCGTC
GCCCAGGGCA AGGAGCACGA GCATTCACCG CTGAAGGAAA CCCTGCGCCA CCATGGCCGG
GTCATTCGCA ACCTGGGGGC GTTCATTTCG CTGACCGCAT TGTCGTTCTA CATGTTCACC
ACCTACTTCG CCACCTACCT GCAACTGGTC GGCAACCTGA CCCGCGCGCA GTCACTGCTG
GTAACCACCG TGGCCCTGCT GTTCGCTGCG GTCGGCTGCC CGCTGGCCGG GGCATTTTCT
GACCGGGTGG GGCGGCGCAA GACCATCGGC TTTACCTGCC TGTGGGTGAT GCTGTGCGTG
TTCCCGGCGT ACTGGCTGGC CAGCTCTGGC TCGATGTCGG GTGCGCTGCT GGGGGTGATC
CTGCTCGCGG TGGGGGCATT GTGCAGCGGC GTGGTTACCG CAGCCTTGCT CTCGGAAAGC
TTCCCTACCC GTACCCGCTA CACCGCTTCG GCAATTACCT ACAACGTGGC CTACACGCTA
TTTGGCGGCA CAGCGCCGCT GGTGGCAACC TGGCTCATCG GGCAGACCGG CAGCAGCCTG
GCACCGGCGT TCTACCTGGT GGTGATTGCG CTGGTGGCGT TGGTGGGCGG GTTGGCGTTG
CCGGAAACGT CGCGGATTTC TTTGCATGAC GACCTGGGTG TGGACGGTGT ACGGGCTGGT
GCCCGAAGGG CCGTTTGA
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| Protein sequence | MSAYHEVSPA TLRRVIAASA IGNFVEWFDF AVYGFLATLI ASQFFASEDA SVALLKTFAV
FAVAFALRPL GGIVFGALGD RLGRKRILSL TILLMAGSTT LIGLLPTYAS IGLAAPALLT
LARCLQGFSA GGEYAGACAY LMEHAPDNKR AFYGSFVPVS TFSAFACAAV IAYGLEASLS
TEAMNAWGWR IPFLIAAPLG LVGLYLRWRM EETPAFREAV AQGKEHEHSP LKETLRHHGR
VIRNLGAFIS LTALSFYMFT TYFATYLQLV GNLTRAQSLL VTTVALLFAA VGCPLAGAFS
DRVGRRKTIG FTCLWVMLCV FPAYWLASSG SMSGALLGVI LLAVGALCSG VVTAALLSES
FPTRTRYTAS AITYNVAYTL FGGTAPLVAT WLIGQTGSSL APAFYLVVIA LVALVGGLAL
PETSRISLHD DLGVDGVRAG ARRAV
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