| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3277 |
|---|
| Symbol | |
|---|
| ID | 5190433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3686186 |
|---|
| End bp | 3687196 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640587724 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_001268587 |
|---|
| Protein GI | 148548485 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCCC GTTTCGCCAC CCTACTCGCT GGCCTAGGCT TCACTGGCCT GGCCCAGGCC
GCTGCCACCC ACTATCCGCT GACGGTCGAC AACTGCGGCA AGCCGCAGGT TTTTGCCCAG
GCGCCGCAGC GCGCCGTTAC CATCGGCCAG GCCGGTACCG AGCTGCTCTA TGCCCTGGGG
CTGGGTGACA AGCTGGCGGG CACTTCGCTG TGGTTCAACA ATGTATTGCC CGAATACCAG
GCGGTGAACG CCAAGGTGCC GCGCCTGGCC GACAACGACC CCAGCTTCGA GGCGGTGGTC
GGCAAGCGCC CGCAGCTGGT CGCGGCGCAG TTCGAATGGA TGGTCGGTGC CCAGGGCGTG
GTCGCCACCC GCGAGCAGTT CGATGAGCTG AAGATCCCCA CCTACGTGCT GCCATCGGAC
TGCGAGGGCA AGGACAACCT GGTCGGTGCA GACGGCACCC GCCTGCAAGC GTTCCAGGTA
GACAGCATCT ACAAGAGCGT CAGCCAACTG GCCGAGATCT TCGACGTTCA GGACCGCGGC
GCGGCCCTGA ACGCCGAGTT GCAAGGGCGC CTCGACAGCG CCAGGGCACA ACTGGCCGGC
AAGGACCTGT CGGCAACTTC GGCGCTGTTC TGGTTCTCCA GCGCCGACCT GGACATCGAC
CCCTATGTGG CCGGCCGCCA AGGTGTTGCC GATTTCATGC TGCGCACCCT CGGTGTGCGC
AACGTGGTCG AGTCCAGCGA AGAATGGCCA AGCGTAGGCT GGGAAACCCT GGCCAAGGCC
AATCCGACCT GGCTGATCAT CGCGCGCATG GACCGCCGCC GTTTCCCCGC CGACGACTAC
CAGAAAAAAC TCGAATTCCT GCGCAGTGAC CCGGTAACCC GCAACATGGA CGCGGTGAAG
CACAACCGCA TCATTGTCCT CGACGCTGAC GCCATGCAGG CCGGCATCCG CCTGTTCCGC
GGCGTGCAGA CGCTGTCCAC GGCCTTCGCC AGCGGTAAAG CAGCCCCGTG A
|
|---|
| Protein sequence | MLPRFATLLA GLGFTGLAQA AATHYPLTVD NCGKPQVFAQ APQRAVTIGQ AGTELLYALG
LGDKLAGTSL WFNNVLPEYQ AVNAKVPRLA DNDPSFEAVV GKRPQLVAAQ FEWMVGAQGV
VATREQFDEL KIPTYVLPSD CEGKDNLVGA DGTRLQAFQV DSIYKSVSQL AEIFDVQDRG
AALNAELQGR LDSARAQLAG KDLSATSALF WFSSADLDID PYVAGRQGVA DFMLRTLGVR
NVVESSEEWP SVGWETLAKA NPTWLIIARM DRRRFPADDY QKKLEFLRSD PVTRNMDAVK
HNRIIVLDAD AMQAGIRLFR GVQTLSTAFA SGKAAP
|
|---|
| |