| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3275 |
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| Symbol | |
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| ID | 5190818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3682336 |
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| End bp | 3684564 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587722 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001268585 |
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| Protein GI | 148548483 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCGGGC GCAGGCCGGA ATCCGTGCGC GCGCCTGCCT GCATGGTTCG CCTTTGCGTG
TTTTCCACCG GGATCCATTC ATTCCTGCAG CAGTGGAACG ACATGTCCCG TATGTTCAAA
CTTCACCCCC TGGCGGCCTG CCTGGCCGTT GCCCTGCCGG CGCTGGCTGA TGACCGCGAC
CCGCAGCCTC TGGCCCTGCC TTCCACGGCC ATCACCGACA CCCAGGACAA CCGCACCATC
GACCTGGCCA CGCCGACCCA GGCCGGTTCG CGCCTTGGCC TCAGCGCCCT GGAAACACCG
GCCAGCACCA GCAGTATCAG CGAACGGCAG ATTCAGCAGC GCAACAACAT CACGGTGCAG
GATGCAGTGA CCCGCTCACC GGGCATTACC TTCGTCGGCT CCCCGGGGGA CGGCGGTACA
GGCCTGTCTG CCCGCGGCTT TGCCGGCCAC AGCTCAGTGA TGACCCTGTT CGACGGCGCG
CGCCTGTACA CCGGTGCCGG CACACAGACC TTCCCGGTCG ACCCGTGGAT GGTCGAACGC
ATCGAGGTGA TTCGCGGCCC GGCCTCGGTA CTGCATGGCG AAGGCGCCAC CGGCGCAGTG
ATAAACGTGA TCCCGAAAAA ACCTTTTGCC GGCGAGGTGC GCAACCACCT GCGACTGGGT
TACGGCTCGT GGGACCGCCA GCAGCTCGGC CTGGACAGCG GCGGCAGCCT CAGCGAGCGC
CTGAGCTACC GCCTGACGCT GAACCAACAG GCCGGCAATG GCTGGGTCGA CCGCACCGCT
TCACGTAGCC TGGCCCTGAG CGCCGCGCTG CGTTTTGACG CCAGTGATGA CCTCAGCTTC
ACGCTGGCCC ATGACCGCGG CGATGCACAA CCTGCCAACT ACTACGGTAC CCCGCTGATC
GACGGCCACT ACCGCAGCAG CCTGCGCAAA AAGAACTACA ACGTGCAGAA CGACGTGCAG
CAGTACGTTG ATGAATGGAC CCGGTTAACG ACCGACTGGG CGCTGAACGA CCAGCTCAGC
GCCAGCAACC AGCTGTACTA CATCAAAAGC CGCCGCCACT GGCGCAACGC CGAAGACTAC
AGCTGGGACG CCGGGCGTCA GCAGTTGCTG CGCGGCAGCT ACCTGGAAAT CAAGCACAAC
CAGGAACAGT TCGGCGACCG TCAAACCTTC ACCTTCGACC ACACCCTGTT CGGCCTGGAC
AGCAAGACCG TGCTCGGTGC CGAATACAAC AAGGTGCGAT TCAACGTCGA CAGCAATTCA
CCCTACAACG ATGTCGGCGG CGACTACCTC GACCCGTGGC AGCCGCAGCC CGGCGGGTTT
CATAGCGCCT CGCCGTTGCG GCCGCAAACA CTCTCGACCA CCCATACCTT TGCCCTGTTT
GCCGAAAACC GCCTGCAATT GAGCGATCGC CTGTCTTTGG TTACCGGCGT GCGTCGCGAC
CAGAACCACA TCGACCGCAA CAACTTGACC AACGACAGCC GCAGCGATCG CAGCCTGCAA
GGGGGCAACT GGCGCGTCGG GCTGGTGTAC GCAATCAGCG ACGACCTGTC GTTGTACGGC
CAGTACTCGA CCAGCGAGGA CGGGGTCAAC AACCTCATCA GCCTCAGCCC CGCGCAGATG
AACTATGACC TGACCGAGGC GAAGCAGACC GAGGCCGGCC TCAAGCAGCG CTTTTGGGAG
GGGCGCGGCG AATGGACGCT TGCCGCCTAC CACATCGTCA AGAAAAAGCT GCTGGTGGAC
GACCCCATCA CGCACGAGAA GCAACAAGCC GGGCAGCAGA CTTCCGATGG CCTGGAAGCG
ACGCTGGAGC TGGCCCTGGC CCATCAGTGG CAGGTGTCGG CCAACGCATC GCTGATACGC
GCCAAGTACG ACGACTTCGA CGAAAGGGTC GGCGGCCTGC CGCAGGATCG GGCAGGCAAC
CGGCCGGCCA ACGTGCCACG GCGTACCGCC AACCTTTGGT TGAGCAAAGG CTTCGGCCAG
CAGGTGGAGG CTGGCATTGG GGCGCGCTAT GTGGATGAGC GTTATGCCGA TACCGCCAAT
ACCCAGAGCG CCCCCGGGTA CACCGTGGTC GATGCCAACA TCGCCTGGCG GGTGTTGCCG
GATGTGAAGG TGGGGTTGCA GTTGAACAAC CTGTTCGATC GCGAGTATGT GCAGTCGGCG
TTCAGCGGTC AGCAGTGGTT GATGGGGATA CCGCGGTCGT ACTTCGCGAC GGTGGATTAC
AGCTTCTGA
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| Protein sequence | MGGRRPESVR APACMVRLCV FSTGIHSFLQ QWNDMSRMFK LHPLAACLAV ALPALADDRD
PQPLALPSTA ITDTQDNRTI DLATPTQAGS RLGLSALETP ASTSSISERQ IQQRNNITVQ
DAVTRSPGIT FVGSPGDGGT GLSARGFAGH SSVMTLFDGA RLYTGAGTQT FPVDPWMVER
IEVIRGPASV LHGEGATGAV INVIPKKPFA GEVRNHLRLG YGSWDRQQLG LDSGGSLSER
LSYRLTLNQQ AGNGWVDRTA SRSLALSAAL RFDASDDLSF TLAHDRGDAQ PANYYGTPLI
DGHYRSSLRK KNYNVQNDVQ QYVDEWTRLT TDWALNDQLS ASNQLYYIKS RRHWRNAEDY
SWDAGRQQLL RGSYLEIKHN QEQFGDRQTF TFDHTLFGLD SKTVLGAEYN KVRFNVDSNS
PYNDVGGDYL DPWQPQPGGF HSASPLRPQT LSTTHTFALF AENRLQLSDR LSLVTGVRRD
QNHIDRNNLT NDSRSDRSLQ GGNWRVGLVY AISDDLSLYG QYSTSEDGVN NLISLSPAQM
NYDLTEAKQT EAGLKQRFWE GRGEWTLAAY HIVKKKLLVD DPITHEKQQA GQQTSDGLEA
TLELALAHQW QVSANASLIR AKYDDFDERV GGLPQDRAGN RPANVPRRTA NLWLSKGFGQ
QVEAGIGARY VDERYADTAN TQSAPGYTVV DANIAWRVLP DVKVGLQLNN LFDREYVQSA
FSGQQWLMGI PRSYFATVDY SF
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