| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3267 |
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| Symbol | |
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| ID | 5192803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3674216 |
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| End bp | 3675457 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587714 |
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| Product | sugar efflux transporter |
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| Protein accession | YP_001268577 |
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| Protein GI | 148548475 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.740896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGACCTG TTGCTTTGTC TGCGGAGAAG CGGTTTCCAC CCATGAACGG ACCCATACCC
ACACACCTGC CGCCCACAAC GGGCAGCGGC AGCTGGCTGA GCGTCATCGC CCTGGCCTTG
GCGGCCTTCA TTTTCAACAC CACCGAGTTC GTCCCGGTGG CGCTGCTCAG TGACATTGGC
CGCAGCTTCG ACATGAGCAC TGCCCAGGTC GGCCTGATGC TGACCATCTA TGCCTGGATC
GTGGCGCTGG CCTCGTTGCC CATGATGTTG CTGACCCGCA ACATCGAACG GCGGCGTCTG
CTGCTGTTCG TGTTCCTGGT GTTCATTGTC AGCCACGTGC TGTCGTGGCT TTCGCAGAGC
TTCGCCATGC TGCTGGTCAG CCGTATCGGC ATTGCCCTGG CGCATGCGGT GTTCTGGTCC
ATCACCGCCT CGCTGGCGGT GCGTGTGGCG CCGCCGGGCC AGCAGGCCAA GGCGCTGGGC
CTGCTGGCCA CCGGCACTAC CCTGGCCATG GTCCTGGGCA TCCCGCTGGG CCGTGTGGTG
GGCGAGGCAC TGGGCTGGCG CATCACGTTC CTGAGCATTG GCGGGGTAGC GCTAGCCACC
ATGCTGTGCC TGATGAAATC GCTGCCGCTG CTGCCCAGCC AGAACTCCGG TTCGTTGCGC
AGCCTGCCGG TCCTGTTCAA GCGCCCGGCA CTGGTCATTA CCTACTTGTT GGTGACGTTG
GTCATTACCG CGCAGTTCAC GGCCTACAGC TATATCGAGC CGTTCGCCCT GCACGTAGCG
CAGATCGGCG GCGACCGCAC CACACTGTTG CTGCTGTTGT TCGGCGGTGC CGGGGTTTTT
GGTTCGTTGT TGTTCAGCCG TTACAGCGAC CGCTTCCCGC ATGGCTTCCT GGTGGGTTCG
ATCGGGGTAC TCGCCGCGTG CCTGTTGCTG ATGTTGCCGC TGTCGGGCAA CTTCTATGTG
TTCGCAGTGC TGAGCATGTT CTGGGGCGTG GCCATTCTCA GCTTCAGCCT GGCGCTGCAG
TCCAAGACCC TGAAGCTGGC GTCCGACGCC ACCGATGTGG CCATGGCGCT GTTCTCGGGT
ATCTACAACA TCGGTATTGG CGGGGGTGCG CTGCTGGGCA GTATCGTCAG CAGCCAGATG
AATGTGGCGG ATATCGGCCT GGTGGGCGGC AGCGTGGCAG TGGTCGGGCT GGTACTGGCC
GTTGCCAGTA CCCGGCGTTT TCGCGAGGCG TTGGCACGCT GA
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| Protein sequence | MRPVALSAEK RFPPMNGPIP THLPPTTGSG SWLSVIALAL AAFIFNTTEF VPVALLSDIG
RSFDMSTAQV GLMLTIYAWI VALASLPMML LTRNIERRRL LLFVFLVFIV SHVLSWLSQS
FAMLLVSRIG IALAHAVFWS ITASLAVRVA PPGQQAKALG LLATGTTLAM VLGIPLGRVV
GEALGWRITF LSIGGVALAT MLCLMKSLPL LPSQNSGSLR SLPVLFKRPA LVITYLLVTL
VITAQFTAYS YIEPFALHVA QIGGDRTTLL LLLFGGAGVF GSLLFSRYSD RFPHGFLVGS
IGVLAACLLL MLPLSGNFYV FAVLSMFWGV AILSFSLALQ SKTLKLASDA TDVAMALFSG
IYNIGIGGGA LLGSIVSSQM NVADIGLVGG SVAVVGLVLA VASTRRFREA LAR
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