Gene Pput_3263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3263 
Symbol 
ID5190852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3670981 
End bp3671634 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content61% 
IMG OID640587710 
Productdihydropteridine reductase 
Protein accessionYP_001268573 
Protein GI148548471 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.482733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCG TATCGCTGGC CAAGCGCCGT TACACCACCA AAGCTTACGA TGCCTCACGC 
CGCATTCCCC AGGCCACCGT CGACGCCCTG CTCGAACAAC TGCGTCACAG CCCGTCGTCG
GTCAATTCCC AGCCCTGGCA TTTCATCGTC GCCGACACGG CCGAAGGCAA GGCCCGCCTG
GCCAAGAGCA CTGCTGAGGG TTATGCCTAC AACACGCAGA AGCTTCTCGA TGCCTCGCAT
GTGATCGTGT TCTGCACCCG TACCGAAATG ACTGAAGAAC ACCTGAACGC CGTGCTCGAT
CAAGAGGCTG CCGATGGCCG TTTCCGTGAT GAGCAAGCGC GCGCCGGGCA AAACCAGAGC
CGCCGGCACT ACGTCAACCT GCACCGCTTC GACCAGAAGG ATGTGCAGCA CTGGATGGAA
AAGCAGACCT ACCTGGCGTT GGGAACTGCC TTGCTGGGTG CAGCGGCGCA TGGGCTGGAT
GCCACGCCGA TCGAGGGCTT CGACAGCAAG GTCCTCGATG CCGAACTGGG TTTGCGTGAG
CGTGGCTTTA CCAGTGTGGT GATCCTGAGC CTGGGTTACC GCAGTGAGGC GGACTTCAAT
GCCGGGCTGA GCAAGTCGCG GTTGCCGGCA TCGCAAGTGT TCACCTTCCT GTGA
 
Protein sequence
MDTVSLAKRR YTTKAYDASR RIPQATVDAL LEQLRHSPSS VNSQPWHFIV ADTAEGKARL 
AKSTAEGYAY NTQKLLDASH VIVFCTRTEM TEEHLNAVLD QEAADGRFRD EQARAGQNQS
RRHYVNLHRF DQKDVQHWME KQTYLALGTA LLGAAAHGLD ATPIEGFDSK VLDAELGLRE
RGFTSVVILS LGYRSEADFN AGLSKSRLPA SQVFTFL