| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3259 |
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| Symbol | |
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| ID | 5195272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3667515 |
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| End bp | 3668438 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587706 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001268569 |
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| Protein GI | 148548467 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.48256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.503791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTA GCAAGGTCGA CCTCAACCTG TTCATCGTGT TCGATGCGAT CTACACCGAA
GCCAACCTGA CCCGCGCCGG GCAGATCGTC GGCATTACCC AGCCGGCAGT GTCCAATGCC
CTGTCGCGCC TGCGCGAAAC CTTCAATGAC CCGCTGTTCG TGCGCACTGC GCAAGGCATG
GTGCCCACCC CCATGGCGCA GAACATCATC GGCCCTGTGC GCAACGCGCT GGCGCTGCTG
CGGACTTCGG TGCAGGAAAG CCGCATTTTC AATCCGCAGC AGGCCAACAA GACCTTCCGC
ATCAGCATGA CCGACCTGAC CGAGGCGGTC ATCCTGCCGC CGCTGTTCCA GCGCCTGCGC
CGCCTGGCGC CGGCAGTCAT GATCGAAAGC TTCCTGTGCA AGCGCCGCGA GACCACCAAG
GAACTCGCGG CCGGCCGCCT GGACTTTGCC ATCGACGCGC CACTGAACAC CGACCCGCAG
GTGCGCCACA TCAAACTGAT GCAAGACCGC TATGTCTGCG CCCTGCGCCA GGGTCACCCG
CTGGCCGACA GCAAGCTGAC CCTCGACAGC TACCTGGGCA TGACCCACAT CCATATCTCC
AGCCGCCGCA ACGGCCTGGG TTACGTCGAC CTGGCGCTGG GCAAGATGGG GGTTCAACGC
AAGGTCGCCC TGCGTTCGCA ACACTACCTG ATGGCGTCGC AGGTGTTGCA GCAGACCGAC
ATGGCGATGA CGGTCCCCGA GCGCTTCGCC CGTCGCCATC AGTTGCGTTA TCAGGCGCTG
CCGGTGGAGG TCCCTGCGCT GGAAACGCAC CTGTACTGGC ATGAAAGCAC CGACCAGGAC
CCGGCCAACC GCTGGATGCG CGAGCAGATT ACGGAATTGT GCGAGCGCGT GGTTGCAGAG
GAAGAGAAGG CTCTGGAGCC CTGA
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| Protein sequence | MNLSKVDLNL FIVFDAIYTE ANLTRAGQIV GITQPAVSNA LSRLRETFND PLFVRTAQGM
VPTPMAQNII GPVRNALALL RTSVQESRIF NPQQANKTFR ISMTDLTEAV ILPPLFQRLR
RLAPAVMIES FLCKRRETTK ELAAGRLDFA IDAPLNTDPQ VRHIKLMQDR YVCALRQGHP
LADSKLTLDS YLGMTHIHIS SRRNGLGYVD LALGKMGVQR KVALRSQHYL MASQVLQQTD
MAMTVPERFA RRHQLRYQAL PVEVPALETH LYWHESTDQD PANRWMREQI TELCERVVAE
EEKALEP
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