Gene Pput_3252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3252 
Symbol 
ID5193003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3661258 
End bp3661902 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID640587699 
Producthypothetical protein 
Protein accessionYP_001268562 
Protein GI148548460 
COG category[S] Function unknown 
COG ID[COG3132] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAC ACGAAACCGC AGGTGAAGGC CGCTTCAACA GCATCGAGGT CCGCGTTCTC 
GGCTCGCTGA TCGAAAAGCA GGCCACCAGC CCAGAAAGCT ACCCGCTGAC CCTCAATGCC
CTGGTCCTGG CCTGCAACCA GAAGACCAGC CGCGAGCCGG TGATGAACCT CACCCAAGGC
CAGGTCGGCC AGGCCCTGCG CGTCCTCGAA GGTCAGGGCA TGACCCGCCT GCAGATGGGC
AGCCGTGCCG ACCGCTGGGA ACATCGGGTA GACAAGGCAC TGGAGCTGGT GCCAGCGCAG
TTGGTGCTGA TGGGCCTGAT GTTCCTGCGG GGCCCGCAAA CCCTCAACGA ACTGCTGACC
CGTAGCAACC GCCTGCACGA CTTTGACGAC ACCGAGCAGA TCCAGCATCA GCTGGAGCGC
CTGATCTCGC GGGGCCTGGC CTTGCACCTG CCACGCCAGG CCGGCCAGCG TGAAGACCGC
TACACCCATG CCTTGGGCGA CCCGGCGGAA ATCGAGGCAA TTCTCGCTGC ACGGCAGCAA
GAAGGCGGCG GGCGCAGTGG CGGCAGTGTG TCAGAAGAAC GCATCGAGGC CCTCGAAGCC
CGCATTGCGG CGCTGGAAGC ACGCCTGGCC GAGCTGGAAG GCTGA
 
Protein sequence
MSEHETAGEG RFNSIEVRVL GSLIEKQATS PESYPLTLNA LVLACNQKTS REPVMNLTQG 
QVGQALRVLE GQGMTRLQMG SRADRWEHRV DKALELVPAQ LVLMGLMFLR GPQTLNELLT
RSNRLHDFDD TEQIQHQLER LISRGLALHL PRQAGQREDR YTHALGDPAE IEAILAARQQ
EGGGRSGGSV SEERIEALEA RIAALEARLA ELEG