| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3234 |
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| Symbol | |
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| ID | 5193509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3643707 |
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| End bp | 3644702 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587679 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001268544 |
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| Protein GI | 148548442 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.113216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.797673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA CCCCGCTCAA CAACCAGGAA GCCGCCCCCG TGCGCCGCAG CGGTACCTAC
TTTGGCCTGG GCACCTACCT GGGCCTGGCT GGCGCCTTGC TGGCGATGAT CGTGCTGTTC
TCGTTCCTCA GCAGCCACTT CTGGTCGTAT GGCACCTTCA GCACGCTGGC CAACCAGATC
CCGGACCTGA TGGTGCTGGC GGTGGGCATG ACCTTCGTGT TGATCATCGG CGGCATCGAC
CTGTCGGTGG GCTCGGTGCT GGCGCTGGCC GCCTCCACGG TGAGCGTGGC GATACTCGGC
TGGGGCTGGG GCGTGCTGCC CTCGGCGCTG CTGGGCATGG CTGTGGCCGC ATTGGCCGGC
AGCATTACCG GTGGCGTCAC CGTGGCCTGG CGCATCCCGT CGTTCATCGT CTCGCTTGGT
GTGCTGGAGA TGGCCCGTGG CCTGGCCTAC CAGTTCACCG ACTCGCGCAC CGCCTATATC
GGCGACGCCT ACGCCTGGTT CTCCAACCCG GTCGCCTTTG GTGTTTCGCC AGCGTTCATC
ATCGCCTTGT TGGTGATCGT GCTCGCCCAG TTGGTACTGA CGCGTACGGT GTTCGGCCGT
TACCTGATCG GTATCGGCAC CAATGAAGAG GCCGTGCGCC TGGCCGGTAT CGATCCGCGC
CCTTACAAAG TGCTGGTGTT CGCCCTGATG GGCCTGCTCG CCGGCCTGGC CGCACTGTTC
CAGATCTCGC GACTGGAAGC CGCCGACCCC AACGCCGGGT CTGGCCTGGA GCTGCAGGTC
ATTGCCGCCG TCGTGATCGG CGGTACCAGC CTGATGGGCG GGCGTGGCTC GGTCATCAGC
ACCTTCTTTG GCGTACTGAT CATTTCCGTA TTGGCCGCCG GGCTGGCGCA GATCGGCGCC
AGCGAGCCGA CCAAACGCAT TATCACCGGG GCGGTGATCG TCATCGCCGT TGTGCTCGAC
ACTTACCGTA GCCGGCGCGC AGGCCGGCGG AACTGA
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| Protein sequence | MKTTPLNNQE AAPVRRSGTY FGLGTYLGLA GALLAMIVLF SFLSSHFWSY GTFSTLANQI
PDLMVLAVGM TFVLIIGGID LSVGSVLALA ASTVSVAILG WGWGVLPSAL LGMAVAALAG
SITGGVTVAW RIPSFIVSLG VLEMARGLAY QFTDSRTAYI GDAYAWFSNP VAFGVSPAFI
IALLVIVLAQ LVLTRTVFGR YLIGIGTNEE AVRLAGIDPR PYKVLVFALM GLLAGLAALF
QISRLEAADP NAGSGLELQV IAAVVIGGTS LMGGRGSVIS TFFGVLIISV LAAGLAQIGA
SEPTKRIITG AVIVIAVVLD TYRSRRAGRR N
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