| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3231 |
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| Symbol | |
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| ID | 5194324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3641361 |
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| End bp | 3641759 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587676 |
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| Product | D-ribose pyranase |
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| Protein accession | YP_001268541 |
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| Protein GI | 148548439 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.743433 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA CCCCGCTGCT GAACGTTGCC CTGTCGCGAG TCATTGCCGG CATGGGGCAT
GGCGATATCC TGGTGATCGG CGATGCCGGG CTGCCGGTGC CGCCGGGTGT CGAGCTGATC
GACCTGGCCA TTACGCCTGG CCTGCCGGAC TTCGCCAGCG TGCTGCGGGT GGTGCTGAGC
GAATTGCAGG TTGAGCGGCA CGTGCTGGCT GAAGAAATGC AGAAAGTGGT GCCACCTGCG
CTGGTCGAAA TCGAGCGACT GAAGGGCAAG CTGGGCAAGC GCGAATGGCT GACCCATGAG
GATTTCAAAG TGCTGTCGCG CAGTGCCCGT GCGGTGGTGC GTACAGGCGA GTGCCAGCCC
TACAGCAACA TCGCCCTCAT CTCCGGCGTC ACCTTCTAG
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| Protein sequence | MKKTPLLNVA LSRVIAGMGH GDILVIGDAG LPVPPGVELI DLAITPGLPD FASVLRVVLS
ELQVERHVLA EEMQKVVPPA LVEIERLKGK LGKREWLTHE DFKVLSRSAR AVVRTGECQP
YSNIALISGV TF
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