Gene Pput_3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3221 
SymbolpheS 
ID5193512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3634058 
End bp3635074 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content61% 
IMG OID640587666 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_001268531 
Protein GI148548429 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.562763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACC TGGATGCGCT GGTCTCCCAA GCCCTAGAGG CCGTGGAACG CGCTGAAGAC 
ATCAACGCCC TGGAACAGAT CCGGGTTAAT TATCTCGGCA AGAAGGGCGA GCTGACCCAG
GTGATGAAGA CCCTGGGCAA CCTGCCAGCC GAAGAGCGAC CGAAAGTCGG CGCGCTGATC
AACGACGCCA AAGAGCGCGT CACCGTTGTG CTCAATGCCC GCAAGGCTGC CTTTGAAGAA
GCCGAGCTCA GCGCTCGCCT GGCTGCCGAA TGCATTGACG TCACCCTGCC AGGCCGCGGC
CAGGCCACCG GTGGCCTGCA CCCGATCACC CGTACACTCG AGCGCATCGA GCAGTTCTTC
ACCCACATTG GTTACGGCAT CGCCGAAGGC CCAGAGGTGG AAGACGACTA CCACAACTTC
GAAGCGCTCA ACATCCCTGG CCACCACCCG GCGCGGGCGA TGCACGACAC CTTCTACTTC
AATGCCAACA TGCTGCTGCG TACCCACACC TCGCCGGTGC AGGTGCGGAC CATGGAGTCC
ACCCAGCCGC CCATCCGCAT TGTGTGCCCG GGCCGCGTAT ACCGCTGCGA CTCGGATATC
ACCCACTCGC CGATGTTCCA CCAGGTCGAA GGCCTGCTGA TCGATCGCGA TATCAACTTC
GCCGACCTCA AGGGCACCAT CGAAGAATTC CTGCGCGTAT TCTTCGAGAA AGAACTGGCG
GTCCGTTTCC GCCCATCGTT CTTCCCCTTC ACCGAGCCGT CTGCAGAAGT CGACATCCAG
TGCGTGATGT GTTCCGGCAA CGGCTGCCGC GTGTGCAAGC AAACCGGCTG GCTGGAAGTG
ATGGGCTGCG GCATGGTGCA CCCGAATGTG TTGCGCATGT CCGGCATCGA CCCAGAAGAG
TTCCAGGGCT TCGCCTTCGG CATGGGTGCC GAGCGCCTGG CCATGCTGCG CTATGGCGTC
AACGATTTGC GTCTGTTCTT CGACAACGAC CTGCGGTTCC TAGCCCAATT CCGCTAG
 
Protein sequence
MENLDALVSQ ALEAVERAED INALEQIRVN YLGKKGELTQ VMKTLGNLPA EERPKVGALI 
NDAKERVTVV LNARKAAFEE AELSARLAAE CIDVTLPGRG QATGGLHPIT RTLERIEQFF
THIGYGIAEG PEVEDDYHNF EALNIPGHHP ARAMHDTFYF NANMLLRTHT SPVQVRTMES
TQPPIRIVCP GRVYRCDSDI THSPMFHQVE GLLIDRDINF ADLKGTIEEF LRVFFEKELA
VRFRPSFFPF TEPSAEVDIQ CVMCSGNGCR VCKQTGWLEV MGCGMVHPNV LRMSGIDPEE
FQGFAFGMGA ERLAMLRYGV NDLRLFFDND LRFLAQFR