Gene Pput_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3218 
Symbol 
ID5192438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3631001 
End bp3631357 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content55% 
IMG OID640587663 
ProductMerR family transcriptional regulator 
Protein accessionYP_001268528 
Protein GI148548426 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.330484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAC CAAGCCATAA CGACGAACTG CCCCCCATAC CGGGCAAACG CTACTTCACC 
ATTGGTGAAG TGAGCGAGTT GTGTGCCGTA AAGCCACACG TGCTGCGGTA TTGGGAGCAG
GAGTTCGACC AGCTGAACCC TGTGAAGCGG CGGGGGAACC GGCGGTATTA CCAGCGCCAG
GATGTGCTGA TGATCCGCCA GATTCGTGCG CTGCTGTATG ATCAGGGGTT CACCATTGGC
GGGGCGCGGT TGAGGCTCTC CAGTGATGAG GCTAAAGATG AATCCAGCCA GTACAAGCAG
CTGATTCGGC AGATGATTGT TGAATTGGAG GATGTGTTGG TGGTTTTGAA GAAGTAA
 
Protein sequence
MLEPSHNDEL PPIPGKRYFT IGEVSELCAV KPHVLRYWEQ EFDQLNPVKR RGNRRYYQRQ 
DVLMIRQIRA LLYDQGFTIG GARLRLSSDE AKDESSQYKQ LIRQMIVELE DVLVVLKK