Gene Pput_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3216 
Symbol 
ID5194439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3628538 
End bp3629023 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content60% 
IMG OID640587660 
Producthypothetical protein 
Protein accessionYP_001268526 
Protein GI148548424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000749389 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.018368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACTC CGACTTCACT GCTGATTTTC CAGATCACCT GCTGCATTGG CTTGAGCCTG 
TGGCTGAGTA TCAGCCTGAT CAACAACCTG CAGGCCTTTG CCAGCTCAGT CGGGGCGATC
GGGGAGACCA TGTCGATGGC GCCGCTGGCC CAACCTCCCG GAATCAGCCT CCCTTTGCTG
GTGCGAGCGA TGACCTCTCA TGCCATCCAT CGCTTGGCCT TGTCGATCAT CGTGCTGACA
CAGGCAGCCG CCGTTCTCGC GGCTTGGGTT GGCTGCTATG AACTGCTGCT TGGCGCCGGC
CTGGAGGTGG CGAGGCCCTG GTTGAACCTG GCCTTGAGCG CAACGCTCGG GTTCCTGTTC
GCGATGCTGC TGGGCGGGAT ATGGTTCGGC TACTGGATCC GCCAGGAAGG GTTGCAACTG
ACCCATCTGC TGTTGATGGT CTGGATCCTG CTGCACTTCG TCGTACTGAA TGTCCGGTGG
AGTTGA
 
Protein sequence
MDTPTSLLIF QITCCIGLSL WLSISLINNL QAFASSVGAI GETMSMAPLA QPPGISLPLL 
VRAMTSHAIH RLALSIIVLT QAAAVLAAWV GCYELLLGAG LEVARPWLNL ALSATLGFLF
AMLLGGIWFG YWIRQEGLQL THLLLMVWIL LHFVVLNVRW S