Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3216 |
Symbol | |
ID | 5194439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3628538 |
End bp | 3629023 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640587660 |
Product | hypothetical protein |
Protein accession | YP_001268526 |
Protein GI | 148548424 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000749389 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.018368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACTC CGACTTCACT GCTGATTTTC CAGATCACCT GCTGCATTGG CTTGAGCCTG TGGCTGAGTA TCAGCCTGAT CAACAACCTG CAGGCCTTTG CCAGCTCAGT CGGGGCGATC GGGGAGACCA TGTCGATGGC GCCGCTGGCC CAACCTCCCG GAATCAGCCT CCCTTTGCTG GTGCGAGCGA TGACCTCTCA TGCCATCCAT CGCTTGGCCT TGTCGATCAT CGTGCTGACA CAGGCAGCCG CCGTTCTCGC GGCTTGGGTT GGCTGCTATG AACTGCTGCT TGGCGCCGGC CTGGAGGTGG CGAGGCCCTG GTTGAACCTG GCCTTGAGCG CAACGCTCGG GTTCCTGTTC GCGATGCTGC TGGGCGGGAT ATGGTTCGGC TACTGGATCC GCCAGGAAGG GTTGCAACTG ACCCATCTGC TGTTGATGGT CTGGATCCTG CTGCACTTCG TCGTACTGAA TGTCCGGTGG AGTTGA
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Protein sequence | MDTPTSLLIF QITCCIGLSL WLSISLINNL QAFASSVGAI GETMSMAPLA QPPGISLPLL VRAMTSHAIH RLALSIIVLT QAAAVLAAWV GCYELLLGAG LEVARPWLNL ALSATLGFLF AMLLGGIWFG YWIRQEGLQL THLLLMVWIL LHFVVLNVRW S
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