Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3214 |
Symbol | |
ID | 5194147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3626571 |
End bp | 3627377 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640587658 |
Product | HNH endonuclease |
Protein accession | YP_001268524 |
Protein GI | 148548422 |
COG category | [V] Defense mechanisms |
COG ID | [COG3183] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000245895 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0194211 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTCG TCATCGTTGA AAACGATACA TCACAGTGGG AAGACCAGAC AGGCGCTGTC TATCACTTCC CCAAGCGTTA CCAAGCCTTG CTCGCTCAGG GAACCGAGGT TGTTTACTAC AAAGGGCGTA TCAAAGATAA AGCCTTTGCC TCGGTCCGTC TTTGTGCCAA TCCGCACTAT TTTGGCAAGG CACGTATAGG CAAGGTCTAC GCAGATAGCA GTAGTAATAA GGGTGATCTT TTTGCTTTGA TTGAAAATTT CATTCCATTT GAAAGCGCTG TTCCCGCCAA AATCGACGGC GCGTACAGGG AGACTATCCC CGGCAGCCGC GCGAGTAACT ACTGGCGTGA CGGGGTTCGG CTCATTTCTC AGTCTGATTA CGACGCTATC TTAAGCCACG CGAAGCTTTT AGATCCGCGG TTGGATACTG CTCTACCGCA GTCAGAAGAC GATCCGATTA CATTTGAATC GGCTAATGAA GGCAGCAAGA CAAGCTACTT TGGAACCCGA TACGAACGCC GGAAAGATCT TAGGATGAAG GCTATCGCTA TTCACGGGCT TGACTGCAAA GCATGCGGTT TTGATTTCGA GCAGGCTTAC GGCGAACATG CAAAGGGCTT CATTCACGTT CATCACGTAG TACCTATTTC GAAATTTGGT GGAGAACAGG CTGTGAATCC TGAGACAGAC CTCGTAACGT TATGTGCCAA CTGTCATGCG GTAGTCCACC GCAAGCGCGA CATGACCCTC AGTGTCGATG AGCTGAAAGG CATGTTACGC GGACGATGGG TCGTCGAACC TCAGTAG
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Protein sequence | MPVVIVENDT SQWEDQTGAV YHFPKRYQAL LAQGTEVVYY KGRIKDKAFA SVRLCANPHY FGKARIGKVY ADSSSNKGDL FALIENFIPF ESAVPAKIDG AYRETIPGSR ASNYWRDGVR LISQSDYDAI LSHAKLLDPR LDTALPQSED DPITFESANE GSKTSYFGTR YERRKDLRMK AIAIHGLDCK ACGFDFEQAY GEHAKGFIHV HHVVPISKFG GEQAVNPETD LVTLCANCHA VVHRKRDMTL SVDELKGMLR GRWVVEPQ
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