| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3196 |
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| Symbol | |
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| ID | 5193341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3610276 |
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| End bp | 3612687 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640587640 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001268506 |
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| Protein GI | 148548404 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.222384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.197486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTC GCTTTTCCTC CCCCGCCACC CGTATTCGCC AAACCGCGCT AGCGGTCGGC
TTCGCGGGCT CGCTGCTGGG CACTGCACAT GCTTGGGCCG AGCCTGTGGG TTACAGCATC
CCGGCAGGGT CATTGGCTCA CGCACTCGAC CAGTTTGCCG ACGCCAGCGG GGCAGTCATC
AGTTTCAGCC ATGAAGCAGT CGCAGGCTTG CACAGCAAAG GGCTGCACGG CAATTACGCG
CTGCATCAGG CGTTGGCAGA ACTGCTGCAA GGCAGTGGCT TGCAGGTACA GGCAGCGGGC
GACAAGCGCT TCATGCTGGT TAGCGCTGAA CAGGATGGCG CCATGGAGCT TGCAGCAACC
ACCGTCTCCA GCATGGCCCT GGGTGCCACC ACCGAAGGCA CCGGCAGCTA CACCACCGGC
TCGGTCAATA CCGCAACCGG GCTGCGGCTG TCTGCACGCG AGACACCCCA ATCGGTCAGC
GTGGTCACCC GCCAGCAGAT TGAAGACCAG AACCTGAACG ATGTTGCCCA AGTGCTTGAA
CAGACACCAG GCGTGGTCGT TGACAGCATG GGGCCCGCCG GAAGCGACGC CAACCCTATC
TACGTGCGCG GCTTCGAGGT CGGCAGCATC CAGGTGGACG GCATCAACCG CCCCGATACC
TTTGGCTTCA GGGACGACCT CTCCGACATG GTGTCCTATG ACCGGGTAGA GGTAGTGCGC
GGTGCCACGG GCCTGATGTC CGGCACTGGC GACCCGGGCG CCACCGTCAA CCTGATCCGC
AAGAAGCCGA CCCTGGAAAC ACAACGCAAG CTGACCTTGA AAGCGGGCTC GTGGGACAAC
TACCGCACCG AGCTGGACGT TTCTGGCAAG TTGACGCAAA GCGGCAATGT CCGCGGGCGC
TTTGTCGCCT CCAATACCGA CAGCCAGAGC TACGTCGACC GCCAATCGCT GGAAAGGCAG
GTGGCCTATG GGGTGCTGGA GTGGGACATC ACCGACAGCA CGATGCTGAC AGCAGGTGCG
GAATATCAGG AGATGGACAA CGACGGGGCA GGCAACCACG GCTTCCCGAT GTTCAATTCA
GATGGCAGTC ACTTCAGCCC CTCCCGCGCG TTCAATTCGG CTTCGGACTG GAGCTATCAC
AAGCGTCGCA CCAAGACGGT ATTCACTACG CTGGAGCATC AACTGGACAA CGGCTGGCAG
TTGAAACTGA ATGCCGAACA CAGCCGTCGC AGCTATGACG ACGCCTTCGC CACCGCTGCC
AGCGGCACCG TCAAGCCCGA TGGCAGTGGC ATCAGCACCT GGACGGGGCG TTGGGCCGGC
GAGCCCCGGC AGACCTCGTT CGACCTGTCG GCGTCGGGCC CGTTCGAGCT GTTGTCACGC
GAGCACCAGG CCTACCTCGG GGCCAGTCAC TACCGCGCCT ACTACCGCAA CGACGGTTAC
CCACTGTGGG CGATCCAGAC CATCGACAAC ATTTACACCT GGGACGGTTC GCTGGCGATA
CCAGACGCCA TCCATGCCAA GTCCTCGGAA GATGCGCTGG ATGAAACCCA GGACGGCCTG
GTGGCTTCGG TACGCTGGAG CCTGGCCGAT GACCTGTCGC TGATTACCGG GGCGCGGCTG
ATCGACTGGA AACGCGACGA AACCTCTACC ACCCTGTCGT CCGGCGCGAC AAGCCGCACC
TCACGTAGCG AAACCGGGGT CGTCACGCCC TACCTTGGCC TGGTGTATGA CCTCAACGAG
CACTGGTCGG CCTATGCCAG TTACACCACC ATTTTCAAAC CGCAGAGCAA CAAGGATATC
AACGGGACCT ACCTGGACCC GTTGGAAGGC GTTAACTACG AGCTCGGTCT GAAGAGTGAG
TTCTGGGACC AGCGCCTGAC CGCGGCTTTC AGCGTTTTCG AGGTGCACCA GGACAACCTG
GCGGTAGCCG ACGGAAGCAA CCTGGCGCCA GACGGCAACC AGGCCTACCG TGCCGAATCG
GGTACCAAGA CACGTGGTTT CGAGATGGAA ATGGCGGGCG AGATTTTGCC TGATTGGCAG
GTCTCGGCCA GCTACACCTA TGCGGTGAGC AAGGATTCGG ATGGCGACCG CCTGAACACT
GAAATACCGC GAGACACCTT GAAACTGTTC ACCAGCTACC GCCTGGCGAC CCTGCCACAG
TTGAAGGTAG GGGGTGGTGT GCGCTGGCAG GGTACCGAAT ATTACAAGAG CGCCGGGCCC
AACAACGAAA CGTTCACCCA GGCCCCCTAC AGCGTGGTCG ACCTGATGGC TCAATATGCC
TTCACGCCGC AGACCAGCGT TTCACTGAAC CTCAACAACG TGTTGGACAA AACCTACTAC
ACGGCGATTG GCGCGCGCGG CTGGTATGGC AGCCCACGCA GCGCCACGGC CACGTTGGTG
TACGCGTTCT GA
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| Protein sequence | MSARFSSPAT RIRQTALAVG FAGSLLGTAH AWAEPVGYSI PAGSLAHALD QFADASGAVI
SFSHEAVAGL HSKGLHGNYA LHQALAELLQ GSGLQVQAAG DKRFMLVSAE QDGAMELAAT
TVSSMALGAT TEGTGSYTTG SVNTATGLRL SARETPQSVS VVTRQQIEDQ NLNDVAQVLE
QTPGVVVDSM GPAGSDANPI YVRGFEVGSI QVDGINRPDT FGFRDDLSDM VSYDRVEVVR
GATGLMSGTG DPGATVNLIR KKPTLETQRK LTLKAGSWDN YRTELDVSGK LTQSGNVRGR
FVASNTDSQS YVDRQSLERQ VAYGVLEWDI TDSTMLTAGA EYQEMDNDGA GNHGFPMFNS
DGSHFSPSRA FNSASDWSYH KRRTKTVFTT LEHQLDNGWQ LKLNAEHSRR SYDDAFATAA
SGTVKPDGSG ISTWTGRWAG EPRQTSFDLS ASGPFELLSR EHQAYLGASH YRAYYRNDGY
PLWAIQTIDN IYTWDGSLAI PDAIHAKSSE DALDETQDGL VASVRWSLAD DLSLITGARL
IDWKRDETST TLSSGATSRT SRSETGVVTP YLGLVYDLNE HWSAYASYTT IFKPQSNKDI
NGTYLDPLEG VNYELGLKSE FWDQRLTAAF SVFEVHQDNL AVADGSNLAP DGNQAYRAES
GTKTRGFEME MAGEILPDWQ VSASYTYAVS KDSDGDRLNT EIPRDTLKLF TSYRLATLPQ
LKVGGGVRWQ GTEYYKSAGP NNETFTQAPY SVVDLMAQYA FTPQTSVSLN LNNVLDKTYY
TAIGARGWYG SPRSATATLV YAF
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