Gene Pput_3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3193 
Symbol 
ID5190452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3607554 
End bp3608027 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content65% 
IMG OID640587637 
Producthypothetical protein 
Protein accessionYP_001268503 
Protein GI148548401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.119025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAT CAACAATCAT GACAGCCGTT GTCACCTCAT TGGCGGTGGC CTTGGCCTCT 
GGCCCGGTGC TCGCCGACCC GGGTAATGGC AAAGGCCAGG GCCAAGGTCA GGGGCACGGC
AAGGGCCAGG CGCCGCACGC CCAGGGCCAG GGCAATTCGG GCGGCCACAA GCAGAGCGTC
GGCGGCAATG ACTGGCACGG CGGCCCGTCC ATCGACCGTG GCGATGTACT GGGCATCCTC
GGTGGCCACC GCAACTACTG GAGCCCGGGC CCGGCATTGC CTCCAGGTAT TCAGAAGAAC
CTGGCCCGCG GCAAGCCCCT GCCACCTGGT ATCGCCAAGA AACTGGATGG CCGTCTGTTG
GGGCAGCTGC CTCACTACGA CGGGTATGAG TGGATGCAAG CGGGCGCAGA CCTGATTCTG
GTCGCCGTGG CGACCGGGAT CATTTATGAG GTGTTGAACG GGGCGTTCGA CTAA
 
Protein sequence
MARSTIMTAV VTSLAVALAS GPVLADPGNG KGQGQGQGHG KGQAPHAQGQ GNSGGHKQSV 
GGNDWHGGPS IDRGDVLGIL GGHRNYWSPG PALPPGIQKN LARGKPLPPG IAKKLDGRLL
GQLPHYDGYE WMQAGADLIL VAVATGIIYE VLNGAFD