Gene Pput_3189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3189 
Symbol 
ID5193169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3603874 
End bp3604869 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content60% 
IMG OID640587633 
Product5'-nucleotidase 
Protein accessionYP_001268499 
Protein GI148548397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.43917 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.426629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTACC CCATTGAAGA AAAACTGGTC ATCGGCGTTG CCTCGAGTGC GCTGTTCGAC 
CTCTCCGTTT CCGATGACAT CTACCAGACA CAAGGTGTCG AGGCTTACCG CCAACACCAG
GAGCAGAACC TGGACGAGCC GTTCCCCAGT GGGGTGGCGC TCCCGTTCAT TCGCCGCTTC
CTGAGCATCA ACAAGGCGTT CCCCGACCAG TTGCCGGTGG AAGTGGTGCT GCTCTCGCGC
AACTCGCCGG AAACCGGCCT GCGGGTATTC CGCTCCATCA GCCACTATCA GTTGGACATC
ACCCGCGCGG CATTCATGTC GGGCCGCTCG CCCTACGAAT ACATCCCGGC GTTCAATGCC
TCGCTGTTCC TCAGCGCCAA CGAGGAAGAT GTGCAAAAGG CCATCGACGC CAACTACCCT
GCCGGGCGTG TACTGCCTAC GCGCATCTAC GACGATGAAA TCGACACTGA GCTGCGGGTG
GCCTTCGACT TCGATGGCGT GATTGCCGAC GACGAGGCAG AGCGTGTTTA CAAGCGCAAC
GACAACCTGG ACGACTTTCA GGAACACGAG CGCATGCACA AGGGCACCCC GCATTCGCCG
GGGCCACTGG CAGACCTTTA CCGCAAGCTT TCGCGGATAC GCATGCTGGA GGACCGCAAG
CTGGCCGAGG ACCCGACGTA CCAGCGGATT CTGCGCATTG CCATCGTCAC GGCGCGCAAC
GCGCCTTCGC ACGAGCGAGT AGTGACAACC TTGAAGGATT GGGGCGTATC CCCGGATGAG
TGCTTTTTTC TAGGCGGTAT GGATAAACCC AGGGTGTTGT CGATATTGAA GCCGCATGTG
TTTTTCGACG ACCAGCGCAC GCACCTGCAA TCGCCAGCGG GAAACCTGCC GATGGTGCAT
GTACCGTTTG GGGTGGCGAA TAGAGTGAGC TCGCCTCAGG AACCAGACCT GCAGCAGGAT
CAACTGCCGA TCAGCGCATC ATCCTGCATG CCCTAA
 
Protein sequence
MPYPIEEKLV IGVASSALFD LSVSDDIYQT QGVEAYRQHQ EQNLDEPFPS GVALPFIRRF 
LSINKAFPDQ LPVEVVLLSR NSPETGLRVF RSISHYQLDI TRAAFMSGRS PYEYIPAFNA
SLFLSANEED VQKAIDANYP AGRVLPTRIY DDEIDTELRV AFDFDGVIAD DEAERVYKRN
DNLDDFQEHE RMHKGTPHSP GPLADLYRKL SRIRMLEDRK LAEDPTYQRI LRIAIVTARN
APSHERVVTT LKDWGVSPDE CFFLGGMDKP RVLSILKPHV FFDDQRTHLQ SPAGNLPMVH
VPFGVANRVS SPQEPDLQQD QLPISASSCM P