| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3187 |
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| Symbol | |
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| ID | 5190336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3602244 |
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| End bp | 3603221 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587631 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_001268497 |
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| Protein GI | 148548395 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.331137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.577588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATTG TCATTCCCGA CGACTACCAG GATGTAATCC GTACGCTCGA TTGCTTCGGC
AAGCTGAGCG GGCATGCTGT CAGCGTCCTT CATGAGCTCC CGCCTGCCAC GCTGGAACAA
CTTGCCGCAC GTTTTGCCGA TGCCGACGCC CTGGTACTCA CCCGCGAACG CACACGCATC
GACGCTGCCT TGCTCGACCG CCTGCCCAAC CTCAAGCTGA TCAGCCAGAC CGGCAAGGTG
TCCAGCCACC TCGACCTGGC TGCCTGCACC GCGCGCGGCA TTGCCGTGAC CGAGGGACGC
GGATCGCCGG TAGCGCCTGC CGAACTGGCC TGGGCGCTGA TCCTCAATGC CCGCCGGCAA
CTGGTGCCGG CCATTGATGC CTTCCGCCAA GGCCAATGGC AGGTCAACCT GGGCCAGGCG
CTGGCCGGGC AGACGCTGGG CATCTGGGGC TATGGCAAGA TCGGCCAGCG CCTGGCGCGT
TATGCGCAGG CTTTCGACAT GCCCGTGCTG GTGTGGGGCA GCGACAGCAG CCGCGCCGCA
GCCAAAGCCC ATGGCCACGC TGCTGCCGCC TCGCGTGAGG CGTTTTTTGC CGAGGCGGAT
ATTGTCAGCC TGAACCTGCG CCTTTCGGAT CAGACACGCC ATGGAGTGAC CTTCGACGAC
CTGTCCCACA TGAAGCCCGA CGCCTTGCTG GTGAACGTCA GCCGCGCGGA ACTGATTGCA
CCAGGCGCAT TACTGCAGGC ATTGGATGTC GGGCGGCCGG GCTACGCGGC GGTGGATGTT
TATGAGGAGG AGCCGTTACT CGACCCGGCC CATCCACTGC TGCGCCACCC ACGTGTACTC
AGCACGCCCC ACCTGGGGTA TGTGGAGAAG AACGGCTACG AGCTGTACTT CGGTGACGCC
TTCGACAATG TGCTGGCGTT TTTCGAAGGG GTGCCGAAGA ACGTCGCCAA CCCGCAAGCT
TTGGCACTTC AACGCTGA
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| Protein sequence | MRIVIPDDYQ DVIRTLDCFG KLSGHAVSVL HELPPATLEQ LAARFADADA LVLTRERTRI
DAALLDRLPN LKLISQTGKV SSHLDLAACT ARGIAVTEGR GSPVAPAELA WALILNARRQ
LVPAIDAFRQ GQWQVNLGQA LAGQTLGIWG YGKIGQRLAR YAQAFDMPVL VWGSDSSRAA
AKAHGHAAAA SREAFFAEAD IVSLNLRLSD QTRHGVTFDD LSHMKPDALL VNVSRAELIA
PGALLQALDV GRPGYAAVDV YEEEPLLDPA HPLLRHPRVL STPHLGYVEK NGYELYFGDA
FDNVLAFFEG VPKNVANPQA LALQR
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