| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3183 |
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| Symbol | |
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| ID | 5190974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3597577 |
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| End bp | 3598476 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640587627 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001268493 |
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| Protein GI | 148548391 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.224527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.322731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTCA GTGGCAGATC CGGCGAGATG GAGATTTTTG TCAAGGTGGC GCAAGCGGGC
AGCCTGTCTG CTGCCGCCCG AGCGCTAGGC CTGACGCCCT CGGCGGTCAG CCGCATTCTC
GCCCGCACCG AACAGCGCCT GGGTACCCGC CTGCTGCTGC GCACGACCCG GGCGCTCACC
CTCACCCCCG AGGGAGAGGC CTACCTGCGC GGCGCACGGC GGGTGCTGGC GGACATGCTG
GAAGTGGAAG AAGCCATCAC TGACCAAGGC GTGCCACGCG GGCGCTTGCG GGTCAGCGCT
GCGCTGGGCC ATGCCCGGTT GACCGTAGTG CCGCTGCTGG CGGCCTTCAG CGCACGCTAC
CCGCAAGTGC TGGTTGACCT GACCCTCAGC GACGAGGTGG CTGACATTCT CGGCGGCCAG
GCCGACGTCG CGCTGCGCTT CGGTCACCTG CCGGACAGCT CGTTGAGCGC TCGCGCCATT
GGCGAGACCG GCCAGGTAGT GGTGGCCTCG CCCGATTACC TGCAACGCCA CGGTACCCCG
CTTGAACCTG AAGACCTGGC CCGGCACAAC TGCCTGCGCT TCAACTTCCG CCGCGCGATG
CCCGACTGGC CGTTTCACCG CGACGGGCAT ACATTCTCAC TGAAGGTTAA AGGGAATATC
GAATGCAGCA GCGGCGAAGC GCTGGCGCAG CTGGCCAGGC TGGGCGCCGG CGTGGCGCGT
ATCGGCACCT TTACCGTGGC CGATGACCTG GCCAGCGGGC AACTGGTGCC GTTGCTGGAG
GCTTACAACC CGGGTGATCG GGAACCGATT CATGCGGTGT TCGTCGGCGG CCCGGCGATG
CCGGCGCGGG TGCGGGTGTT TGTGGATTTT CTGGTGGAGC AGCTATCTGG CGGCCTGTAG
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| Protein sequence | MDFSGRSGEM EIFVKVAQAG SLSAAARALG LTPSAVSRIL ARTEQRLGTR LLLRTTRALT
LTPEGEAYLR GARRVLADML EVEEAITDQG VPRGRLRVSA ALGHARLTVV PLLAAFSARY
PQVLVDLTLS DEVADILGGQ ADVALRFGHL PDSSLSARAI GETGQVVVAS PDYLQRHGTP
LEPEDLARHN CLRFNFRRAM PDWPFHRDGH TFSLKVKGNI ECSSGEALAQ LARLGAGVAR
IGTFTVADDL ASGQLVPLLE AYNPGDREPI HAVFVGGPAM PARVRVFVDF LVEQLSGGL
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