Gene Pput_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3176 
Symbol 
ID5192483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3591755 
End bp3592318 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content66% 
IMG OID640587620 
Producthypothetical protein 
Protein accessionYP_001268486 
Protein GI148548384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.705206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCTT TGCCCAGCCA CCCGACCCGC CACACCATCG CCCGCCAGTG GCAACTGCTC 
AAGTTACTGC CCGGCCGCCA CCCAGGCATG AGCTCCACCC AGTTGCAGGC TGCCCTGACA
ACCGTGGGCC ATTCCACCAG CAAACGCACC GTCGAGCGCG ACCTGGTGGA GCTCGCCGCA
CTGTTCCCGC TACAGTGCAA CAGTAAAGGC ATGCCTTATG GCTGGTACTG GCAACCGGGC
TTGAGCCTGG GCGAAGCGCA GCAGCTGCAA CCCGACGCAC TTACCCCCCC GACACACGTT
GTACTGTATG CCTGGGTCGA TGACGCGCTG GCCCGCCGCC TGGAACAGTC ACCCCTGTCC
GTCGATATGC AACTGACGCC GCAGGCTGGC GGCGGCGCCG CGCTGGTGGC CACCGTCGAC
GACAACCGCG CGCTGATGGG CTGGCTGCTG TCCCAGGCGG GCTCGATCCG CATCCAGGCG
CCGCAGGCAC TACGTGCGGC CATGATTGAA CAATTGCGCC AGAGCCTGGC GCTGCATGAG
GGCGAAGGCG GCTGCAAGCA ATAG
 
Protein sequence
MSPLPSHPTR HTIARQWQLL KLLPGRHPGM SSTQLQAALT TVGHSTSKRT VERDLVELAA 
LFPLQCNSKG MPYGWYWQPG LSLGEAQQLQ PDALTPPTHV VLYAWVDDAL ARRLEQSPLS
VDMQLTPQAG GGAALVATVD DNRALMGWLL SQAGSIRIQA PQALRAAMIE QLRQSLALHE
GEGGCKQ