Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3176 |
Symbol | |
ID | 5192483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3591755 |
End bp | 3592318 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640587620 |
Product | hypothetical protein |
Protein accession | YP_001268486 |
Protein GI | 148548384 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.705206 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCTT TGCCCAGCCA CCCGACCCGC CACACCATCG CCCGCCAGTG GCAACTGCTC AAGTTACTGC CCGGCCGCCA CCCAGGCATG AGCTCCACCC AGTTGCAGGC TGCCCTGACA ACCGTGGGCC ATTCCACCAG CAAACGCACC GTCGAGCGCG ACCTGGTGGA GCTCGCCGCA CTGTTCCCGC TACAGTGCAA CAGTAAAGGC ATGCCTTATG GCTGGTACTG GCAACCGGGC TTGAGCCTGG GCGAAGCGCA GCAGCTGCAA CCCGACGCAC TTACCCCCCC GACACACGTT GTACTGTATG CCTGGGTCGA TGACGCGCTG GCCCGCCGCC TGGAACAGTC ACCCCTGTCC GTCGATATGC AACTGACGCC GCAGGCTGGC GGCGGCGCCG CGCTGGTGGC CACCGTCGAC GACAACCGCG CGCTGATGGG CTGGCTGCTG TCCCAGGCGG GCTCGATCCG CATCCAGGCG CCGCAGGCAC TACGTGCGGC CATGATTGAA CAATTGCGCC AGAGCCTGGC GCTGCATGAG GGCGAAGGCG GCTGCAAGCA ATAG
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Protein sequence | MSPLPSHPTR HTIARQWQLL KLLPGRHPGM SSTQLQAALT TVGHSTSKRT VERDLVELAA LFPLQCNSKG MPYGWYWQPG LSLGEAQQLQ PDALTPPTHV VLYAWVDDAL ARRLEQSPLS VDMQLTPQAG GGAALVATVD DNRALMGWLL SQAGSIRIQA PQALRAAMIE QLRQSLALHE GEGGCKQ
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